AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00186 ATGTTGGAGAGCAGATTGATTGCGGTTATATGGAGGACCAAATCCATCAATCAGATAAGATCGTCGTTTTCGTCTCACGGAGGATCGACAAGTATTTATAATCGATTTGCTTTTGATCGTTATTCAGCTTATAAGCATGTTGCTAATCCAATTGCTAGAAGCTGTTTCGTGGATGGCTTTCGATCGTTGCATAATCTCAACAAGGGTTCCTGCAATTCATCTTTCAAGTATATGTCCACTGTAGCTGCAACTGCTTGCAAGGAAAATAAGGAGACTGTGAAGCTCCTTGTTACTGCTGGGCCTCATGCTCAGAAAGCAATAGGAATATGGCTTTTTGCATCCGCTGCTTGGGTCTTCAGTATGGTTATTCTTGGTGGTGTCACACGACTTACTCGATCTGGTCTTTCTATGACTGACTGGAAATTCACCGGCAGCCTTCCTCCTCTATCAGATGAAGATTGGTTGATGGAGTTTGAGAAATATAAACAATCCCCGGAGTTCAAGCGTGTCAACAGAGGAATGAATATTGATGATTTTAAGTTCATTTATTGGATGGAATACGCACATCGTATGTGGGGAAGGGCACTGGGGGTCATGTTTGCTCTCCCATTTTCGTATTTTATTCGAAAAGGTTATATTAATCTACGGCTTGGAGTTAGACTCGCTGCTTTATTTGCTCTCGGTGGTGGGCAAGGGATGATTGGTTGGTGGATGGTTAAAAGTGGTTTAGAAGAACCACCCTCAGAGTACTCCCAACCAAGAGTAAGCCCATACCGTCTTGCTGCTCACCTGACTTCGGCTTTTGCTATATACTGTGGACTCTTCTGGACTGCTCTTTCTGTTGTCATGCCTGAACCTCCTACTGAGTCAGTAGCTTGGGTAAATTCAGCTGCAAGAGTTAAGAGGTTTGCTCTTCCTGTTGGCATCATTGTTGGTATAACTGCGGTCTCAGGAGCCTTTGTTGCAGGAAATGATGCAGGACATGCATTTAATACATTTCCCAAGATGGGTGATTCATGGATCCCAGAAGATGTTTTGAGTATGAAGCCACTTATCCGCAACTTCTTTGAGAACACAGCAACTGTGCAGCTTGATCATCGTATACTTGCAACTGCAACCCTAGCGTCGATTGGTGGTTTATGGTGGTCGGCAAGAAAACTCGACCTACATCCTGCTATTCGTTCTTTGATCGGAAGCACCATGGGGATGGCTGCTTTACAGGTTACGTTGGGCGTATCAACTCTTCTATCTTATGTACCGGTTTCACTCGGCACTGCCCATCAAGCCGGGGCCTTAACCCTTTTGACTCTTATGCTCCTCCTCAATCACACCTTGCGCCGACCATCACCGATGATTCTAAAATCACTACCTGCAATTGCTAAAACCATTTAA 1392 44.47 MLESRLIAVIWRTKSINQIRSSFSSHGGSTSIYNRFAFDRYSAYKHVANPIARSCFVDGFRSLHNLNKGSCNSSFKYMSTVAATACKENKETVKLLVTAGPHAQKAIGIWLFASAAWVFSMVILGGVTRLTRSGLSMTDWKFTGSLPPLSDEDWLMEFEKYKQSPEFKRVNRGMNIDDFKFIYWMEYAHRMWGRALGVMFALPFSYFIRKGYINLRLGVRLAALFALGGGQGMIGWWMVKSGLEEPPSEYSQPRVSPYRLAAHLTSAFAIYCGLFWTALSVVMPEPPTESVAWVNSAARVKRFALPVGIIVGITAVSGAFVAGNDAGHAFNTFPKMGDSWIPEDVLSMKPLIRNFFENTATVQLDHRILATATLASIGGLWWSARKLDLHPAIRSLIGSTMGMAALQVTLGVSTLLSYVPVSLGTAHQAGALTLLTLMLLLNHTLRRPSPMILKSLPAIAKTI 463
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00186 463 Hamap Heme A synthase [ctaA]. 104 448 IPR023754 GO:0006784(InterPro)|GO:0016020(InterPro)|GO:0016653(InterPro)
Armi1g00186 463 Pfam Cytochrome oxidase assembly protein 109 438 IPR003780 GO:0006784(InterPro)|GO:0016020(InterPro)|GO:0016653(InterPro)
Armi1g00186 463 PANTHER CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15 71 460 IPR023754 GO:0005743(PANTHER)|GO:0006784(InterPro)|GO:0006784(PANTHER)|GO:0016020(InterPro)|GO:0016653(InterPro)|GO:0016653(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00186 K02259 heme a synthase [EC:1.17.99.9]