AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00191 ATGGCGGAAATTGCAGGAATGTATGAACACCATATTTTCATGAATAAAAGCATTCAAGTAATCGAGGAAGCGATTTGGACGAAGCATTACTCGTCGAATCATCAGATACTGCTGGTCGGAGAAGGCGATTTCTCGTTTGCTCTCAGTTTGGCTGTCTCGTTTCGATCAGGTTTCAACATCGTAGCTTCTTCTATCGATTCTTATGATGTTGTGATTAGGAAATACAAAAGAGCGAAAACAAACTTGGATCGTTTGTATAAATTGGGAGCTCAGTTGTTATATGGTGTCGATGCAAGAACAATGAAGCTTCATGTTGATCTTCATATGCGAAAGTTTGATCGCGTCGTATACAATTTCCCACATGCCGGTTTTTTCGGAAAAGAAAGCAATCATGGAGTCATCATGATACACAGAAATCTGGTTTGCAGTTTCTTCAAGAATGCAAGTCGGATGTTGCGACCAAACGGCGAAGTTCACGTATCCCACAAGACTAAATTCCCGTTCAACAGTTGGAATATCGAAGAACTCGCCTCCCAAAGTTGTTTGACATTGCTTGAATGTGTCGAATTCAAGCTCGAAGATTACCCGGGATACAACAACAAACGTGGAGACGGGTTGAGATCCGACGAGCCCTTTCCGTTAGGAAAGTGTTGTACTTTCAAATTCGTATTATCATCGACAGCCAAGAAATCAACCACTTTACACCATAGAAATCATCAAGTGCCTCTAGAAATCCCATTGCAGAGAGCGAACGCGAATTTGTTTACGAATCCTGCCCCGGTTATCGACAGCGGGGAATGCTTTAGGATCTTTGTAGAGTATTTCAATCACGCACGATCAACGTATGGGCAACCTGATTGCAATCTATTCGGTTCTGTTTCGAATCATCTGAGATCCGGGTTTCAAAGATACATCACCGAAGATCATGGAAGACAGTTGATTGACTACGTAAATCTTTTGGAAGAGCTTCGACGTTTGAGTGATTGGAGGATCGAATTCTTTCGAAACCGGTTACGGGAAATCGATCACCGGCGCGGCTTGTAG 1044 42.72 MAEIAGMYEHHIFMNKSIQVIEEAIWTKHYSSNHQILLVGEGDFSFALSLAVSFRSGFNIVASSIDSYDVVIRKYKRAKTNLDRLYKLGAQLLYGVDARTMKLHVDLHMRKFDRVVYNFPHAGFFGKESNHGVIMIHRNLVCSFFKNASRMLRPNGEVHVSHKTKFPFNSWNIEELASQSCLTLLECVEFKLEDYPGYNNKRGDGLRSDEPFPLGKCCTFKFVLSSTAKKSTTLHHRNHQVPLEIPLQRANANLFTNPAPVIDSGECFRIFVEYFNHARSTYGQPDCNLFGSVSNHLRSGFQRYITEDHGRQLIDYVNLLEELRRLSDWRIEFFRNRLREIDHRRGL 347
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00191 347 FunFam Os09g0479300 protein 34 185 - -
Armi1g00191 347 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 63 169 IPR029063 -
Armi1g00191 347 PANTHER PHENYLALANYL-TRNA SYNTHETASE 20 215 - GO:0005737(PANTHER)|GO:0070042(PANTHER)|GO:0070475(PANTHER)
Armi1g00191 347 Gene3D Vaccinia Virus protein VP39 27 189 IPR029063 -
Armi1g00191 347 Pfam rRNA (uridine-N3-)-methyltransferase BTM5-like 37 202 IPR019446 GO:0070042(InterPro)|GO:0070475(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00191 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr1:3635245 Armi1g00191 Armi-Chr1:3645643 tandem