AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00205 ATGGAAGAATCGCAAGAGATACTGTTGAACTCCCTGGCGAAATCTGGAGTTCCGATCCCATCGGAGGTTTTCTCAGTCGAAGATCTAACTCCGGAAACCTTCATGTCGATCTGTACTCATTCTCTTCGTATAATTTCCAACTCTGAATCCATTCCAATCACTTCACCGGACTCAATGGCAGATCGTTTCAAAGTCTGCACCGATCTTGCTTCCTCCGTCAAAGACCTAGGTTACATCGGCGACATGAGCTTCCATAAGTTCCTGTATCCATCTGAAGAAGACATGTATAAGTTGATAAGATTTTTGGTTGGGAGGCTCTCTGAATCATCTCCAACTGCAGTATCACAAAACACAAAGGATAATGATGTCAATGCAATGATAAATATAGAGAATCATAGAAGATCTTCCGTTGCTGCTGATGATGAGGGGCAGGATTTGCATACGAAAGTTGAAGACCTTAAACTGAGAACTGAAGAAATGGTTTCAAATTCAATCCAATATGCTGAAAAAGATATTGCAGCTGATGATGCTAGTAGAGGTGGGAATTCAGTAATTGATACTGTTGGATTCACTGTTATGGAAAACGGCAGAAGTTTAGCAGAGGACACGCAGTATTCAAGAAACTCGGCGGGTGGTGATGTAGGGGTGATATCTCAGGACGACAGTCAACATAAGCTTGAGCAGGCACAAATGTCTCTTCGAGAGAATTCATCCCAGACGAGCGGCAAGACAGAAATGTTCCCAAATCAAGAAAATGTGATTTCGGATGAAGTGTCTGCAAAATCATTAGAGTTGCAGCAATTGGAAGAGCAGCATGATTTGTTGAAAGCAGCAGTGGACATGGCTTGTAATGAACAAAACCCTGTGGATTCATACATTGCACAGGTCAGCAAGCAAATAGATGCAAGGAGGCAAAATCTTGCAGAACTGGAGTCAAAATGGAAAGCCATCATAAAGCCTTTAGAAGAGAAGAAAAGAAATCTTGAAGAAACTCTATGTGCAGAACAACCAGAGTCTCAAGAAAAACATCAAAATTGGAAAAAACTCGAGCAGGACTTGGAGTCCGTTTTGTACGAAACAGAGCAGAGGGAGGGGGAACTTTCCAAGCTGTCAACAGAAATCGAGAAACTACCCAAATTGGCGACAAGAAGATCCTACATTGAGCGGATAAAAGAGATCACGAAGAACAGCCGGAAGCAGGATGTTGACATAGAACGTATCTTGAAAGAGACCCGAGAGCTTCAGTTGGAGAGTAACATGATTCAAGAACGCCTGCATCGAACTTACGCTGTGGTAGATGAAACACTGCAGAGGGAGTCAAAGAAGAACCAAGTTGGGGAGCAAGCTCACAATTTGCTGACATCCATCCACGAAAGTTTCGAAGAGATATCAGAAAAGATCCTTGCGACTGATCGAGCTCGTAGAGAAGCTACAGACCTTGAAACTAAGCTTTCCCGCATCGGTGCCCAAAGTTTAAACGTGGGGAAACTCGAAGCAGATCTCGATGCCATCAGGAAGGAAAACGAATACCTTCAATCTCGCTTGGGTAATCCTTAA 1557 43.16 MEESQEILLNSLAKSGVPIPSEVFSVEDLTPETFMSICTHSLRIISNSESIPITSPDSMADRFKVCTDLASSVKDLGYIGDMSFHKFLYPSEEDMYKLIRFLVGRLSESSPTAVSQNTKDNDVNAMINIENHRRSSVAADDEGQDLHTKVEDLKLRTEEMVSNSIQYAEKDIAADDASRGGNSVIDTVGFTVMENGRSLAEDTQYSRNSAGGDVGVISQDDSQHKLEQAQMSLRENSSQTSGKTEMFPNQENVISDEVSAKSLELQQLEEQHDLLKAAVDMACNEQNPVDSYIAQVSKQIDARRQNLAELESKWKAIIKPLEEKKRNLEETLCAEQPESQEKHQNWKKLEQDLESVLYETEQREGELSKLSTEIEKLPKLATRRSYIERIKEITKNSRKQDVDIERILKETRELQLESNMIQERLHRTYAVVDETLQRESKKNQVGEQAHNLLTSIHESFEEISEKILATDRARREATDLETKLSRIGAQSLNVGKLEADLDAIRKENEYLQSRLGNP 518
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00205 518 Coils Coil 293 313 - -
Armi1g00205 518 PANTHER JM1 PROTEIN 144 516 IPR008530 GO:0097602(PANTHER)|GO:2000060(PANTHER)
Armi1g00205 518 Pfam CCDC22 protein coiled-coil region 219 487 IPR048348 -
Armi1g00205 518 Coils Coil 494 514 - -
Armi1g00205 518 Coils Coil 258 285 - -
Armi1g00205 518 Pfam CCDC22 protein N-terminal domain 1 107 IPR048349 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00205 K23343 coiled-coil domain-containing protein 22