Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Armi1g00237	ATGAATATCGTAGAGAAAGAGAGCATTGAAGTGATTGCACAGAGCATCGGCGTTGGCAATTTATCGCCGGATGTCTTGCCTTCTCTAGCCGCCGACATCGAGTACCGTATTAGCGAGATCATGCAGGAGGCTATAAAATGTATGCGTCATGCAAAGCGAACTGCTATGACTTCAGATGATGTGGATAGTGCCCTTGAGCTAAGAAAAATGGAGCCAATATATGTTGCATCTGGGGATTCTTTGCGATTTAAAAGAGCTGCCAGGCATAAGGATTTGTTCTATGTCGAGGACAAGGATGTGGAGTTTAGAGAGGTGATTGAAGCTGCCCTTCCAAAGGCACCTCTAGATACAGCTGTTGTCAATCACTGGCTGGCTATTGAAGGGGTACAACCTGCCATTCCTGAAAATGCTCCGCTGGAAGCACTTTTGACCCCATTCGATAATAAGAAACCTGATTTCAAAGAAGATGGGGTTTCAATTGACATGAAAACTCCTGTGAAACATGTGCTCTCTATAGAGCTTCAGCTTTACTTTGAAAAGATCACAGACCTGACTGTAAGTCGATCAAACTCGATCATCTTTAACAAAGCATTGTTGAGTTTGGCGACTGACGCAGGACTCCATCCTTTGGTTCCTTATTTCATATATTTCGTAGCTGAAGAGGTTACTCGTAATTTAAACAACTTCCAGCTTCTTTTTGCCTTGATGCGCCTTGTTCGGAGTCTCCTACAGAATCCATTTCTGCACATTGAACCATATCTGCACCAACTGATGCCATCTGTAATGACCTGCCTTGTTGCAAAAAGCCTGGGGAATAAGTTAACTGATAACCACTGGGAACTTCGAAACTTCACAGCTAACCTGGTGGCTTCAATATGCAGAAGGTTTGGCCATGGGTATCATAACCTCCAATTACGTGTGACTAGAACTCTTCTTCATGCTTTTTTGGATCCGGCAAAAGCATTTCCCCAACATTATGGTGCTATAAAAGGGATTACTGCCCTTGGATCAAGCGTGGTTCGTCTGCTTTTGCTGCCAAATCTTGATCCATATCTACAAATTATAGAACCAGAAATGCAACTTGAGAATCAAAAAGATGAGACCAGGAGGCATGAGGCAAGGCAAGTACATGGGGCCTTAATGTGTGCAGCTGGTCTATGCATTTACAATCAGCTTAAGATGATTCCTAATCTGTTTTCTCCACCAACACATGCCATCTGGAAGAGTAATGGAAAAGATCTGACTGCAAACCCAAATAAACGGAAGGCGGGCATAAACAACTTGATGATGGAACAGACACTCAAAAAAGCAGCAACAGGTGACGGTTCTGTGGGAGGCCATTTAGTGAAGGTCGAGATGCCAGGAGCCAGCAGCGGATTTTCAATAACTCGTGGAGTCTCTGATGTTGGGGTCCACCCATTACCAAGGTATTTGCCTAACGACAACATTCCAGGTAGCAGTGGTCGTAGAGACAAGTTCGGTGGTGCAGCTCAAACATCATCGGTGGCCGTGGCCCGAGCATGGAAAAAAGAAGTAAATGCTGGACACTTGCTTCCCAAACTCTATGATCTTTTTGGTGAAAGCATGCTTCCATTTGTACCTTCCCCAGAATTGTGTAATATATACATCTGA	1632	44.12	MNIVEKESIEVIAQSIGVGNLSPDVLPSLAADIEYRISEIMQEAIKCMRHAKRTAMTSDDVDSALELRKMEPIYVASGDSLRFKRAARHKDLFYVEDKDVEFREVIEAALPKAPLDTAVVNHWLAIEGVQPAIPENAPLEALLTPFDNKKPDFKEDGVSIDMKTPVKHVLSIELQLYFEKITDLTVSRSNSIIFNKALLSLATDAGLHPLVPYFIYFVAEEVTRNLNNFQLLFALMRLVRSLLQNPFLHIEPYLHQLMPSVMTCLVAKSLGNKLTDNHWELRNFTANLVASICRRFGHGYHNLQLRVTRTLLHAFLDPAKAFPQHYGAIKGITALGSSVVRLLLLPNLDPYLQIIEPEMQLENQKDETRRHEARQVHGALMCAAGLCIYNQLKMIPNLFSPPTHAIWKSNGKDLTANPNKRKAGINNLMMEQTLKKAATGDGSVGGHLVKVEMPGASSGFSITRGVSDVGVHPLPRYLPNDNIPGSSGRRDKFGGAAQTSSVAVARAWKKEVNAGHLLPKLYDLFGESMLPFVPSPELCNIYI	543

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Armi1g00237	543	Gene3D	-	166	371	IPR046344	GO:0006367(InterPro)
	Armi1g00237	543	FunFam	transcription initiation factor TFIID subunit 6	166	371	-	-
	Armi1g00237	543	SMART	TAF-cls	2	68	IPR004823	-
	Armi1g00237	543	Gene3D	Histone, subunit A	1	67	IPR009072	GO:0046982(InterPro)
	Armi1g00237	543	SUPERFAMILY	Histone-fold	3	66	IPR009072	GO:0046982(InterPro)
	Armi1g00237	543	CDD	TAF6C	167	383	IPR011442	GO:0006367(InterPro)
	Armi1g00237	543	Pfam	TAF6 C-terminal HEAT repeat domain	166	348	IPR011442	GO:0006367(InterPro)
	Armi1g00237	543	Pfam	TATA box binding protein associated factor (TAF)	2	65	IPR004823	-
	Armi1g00237	543	SUPERFAMILY	ARM repeat	207	392	IPR016024	-
	Armi1g00237	543	PANTHER	TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6	2	531	IPR037796	GO:0000124(InterPro)\|GO:0003713(PANTHER)\|GO:0005669(InterPro)\|GO:0005669(PANTHER)\|GO:0006367(InterPro)\|GO:0016251(PANTHER)\|GO:0016251(InterPro)\|GO:0046695(InterPro)\|GO:0051123(PANTHER)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Armi1g00237	K03131	transcription initiation factor TFIID subunit 6

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Armi	Armi-Chr1:4272410	Armi7g00343	Armi-Chr7:6228720	wgd