AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00246 ATGAAGATGAACACCAAATCCCTAAAACTTCTCATCTCTCTATTCCTCCTCAATTCAATCACTCTTTATCTCTACTTCTCTTCTCACCCTGATTACTTCCGCCGTCCTCCGCCGTCACCCACAAACCCTCACCATTTCCGTTCATCATTCCCCCACCACACAGCTCTCGTTTCGTTGTCGAATTCCAACAAACCATGGCCGATCTTGCCGTCTTACCTCCCGTGGTCGCTAACACCTAACATCGGTGTTACATCTTGTGAAGCGTATTTCGGTAATGGGTTCACTCGCGCTCTACATCTGCTCAAGCCGTCGCCGGAGGTTTACCGGAGATCTGGTAATGGTGGTGGCGGAGGAGGATGGTTTAGGTGTTTTTATAGTCGGACGTTGCGGAGTTCGATATGTGAGGGCGGGAGGTTGCGGATGCATCCGGAGAAGATTAGGATGTCGCTCGGTGGAGAGGCGGTGGAGAGTGTGATTGGGCGGAGGGAGGAGGAGGAGTTGCCGGAATTTGAATCTGGAGCTTTTGATTTGGAAGTTGGTGAGAGATCCGAGAGGCGTGGTGGGAAGCTTGTTAGTGAGGGGTTTTTGAATGAGTATTTACAGAAAGGGCAGATCTCGAGGCATACGATGCGAGAGTTGATTGATTCGATTCGGTTAGTTGGCGCCAATGAATTCGAATGCTCTCAGTGGATTGAGGAGCCAACACTTTTGGTCACCCGCTTCGAGTATGCAAACCTTTTTCACACAATCACGGACTGGTACAGTGCCTATGTGTCTTCCAGAGTTACTGGCTTGCCAAACCGACCTCAAGTGGTTTTTGTAGACGGTCACTGCATGACACAATTGGAAGAAACATGGAAAGCTGTGTTCTCGGGTCTAAGATATGCTAAAAATTTCAGCGGTCCAGTTTGCTTTCGTCATGCTATCCTCTCACCTTTAGGGTATGAAACCGCCATGTTCAAGGGTCTGTCTGAAAACATCGATTGTTCCGGATCACCTGCCCATGATTTGTGGCAGAACCCCGACGAAAAGAAAACAGCAAGGATCTCAGAATTCGGGGAGATGATAAGAGCTGCTTTTGCACTTCCTTTACAGAGACACCACCAGAACCCAAAGTCAGGATCACGAAGTCATAACATCCTCTTTGTCCGGCGTGAAGATTATTTGGCTCATCCCCGCCACGGTGGCAAGGTTCAATCAAGGCTTAGCAACGAACAAGAAGTATTCGATGCATTAAAAACCTGGTCATGGAATCACACAGAATGCAAATTGAATCTAATCAACGGACTTTTCGGGCATATGTCGATGAAAGAGCAAGTGAGAGCCATTCAGGATGCATCGGTTATCGTTGGTGCTCACGGGGCAGGACTGACTCACATAGTGTCGGCATCACCCGAAGCAGAGATCCTGGAGATCGTTGCCAGCGAGTTTAGGAGGCCTCATTTCGCACTAATTTCTCAGTGGAAAGGGCTGAAATACCACCCAATATATCTGGGTGGATCTCATGCCAACCCAACAGTGGTTATTGAGAAACTGAGGGACATTTTGAAGAGCTTAGGATGTTGA 1566 48.34 MKMNTKSLKLLISLFLLNSITLYLYFSSHPDYFRRPPPSPTNPHHFRSSFPHHTALVSLSNSNKPWPILPSYLPWSLTPNIGVTSCEAYFGNGFTRALHLLKPSPEVYRRSGNGGGGGGWFRCFYSRTLRSSICEGGRLRMHPEKIRMSLGGEAVESVIGRREEEELPEFESGAFDLEVGERSERRGGKLVSEGFLNEYLQKGQISRHTMRELIDSIRLVGANEFECSQWIEEPTLLVTRFEYANLFHTITDWYSAYVSSRVTGLPNRPQVVFVDGHCMTQLEETWKAVFSGLRYAKNFSGPVCFRHAILSPLGYETAMFKGLSENIDCSGSPAHDLWQNPDEKKTARISEFGEMIRAAFALPLQRHHQNPKSGSRSHNILFVRREDYLAHPRHGGKVQSRLSNEQEVFDALKTWSWNHTECKLNLINGLFGHMSMKEQVRAIQDASVIVGAHGAGLTHIVSASPEAEILEIVASEFRRPHFALISQWKGLKYHPIYLGGSHANPTVVIEKLRDILKSLGC 521
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00246 521 PANTHER PUTATIVE-RELATED 11 521 IPR007657 GO:0016757(InterPro)
Armi1g00246 521 Pfam Glycosyltransferase 61 371 469 IPR049625 GO:0016757(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00246 K03714 glycoprotein 2-beta-D-xylosyltransferase [EC:2.4.2.38]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr1:4539188 Armi14g01594 Armi-Chr14:77143382 wgd