AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00251 ATGAAGAGCAATCAGGAATCCAAGAACAAACCGGAAATACAGCCGTTGACCACCCAAGCTTCACAAGAGTCTCAAAGTGACCAGCATAATAATAATAATAATAATAATGCAACAGAGGCTCCTGTTCCTGACTCGGGTTCAGCCTCCATTTCGAGCAACGATAACAGAAAAGTTTCGCGGGAGGATATCGAACTTGTCCAGAACTTGATAGAACGATGTTTGCAGCTGTACATGAACAGAGATGAGGTGGTGAAAACTTTACTAAATCGTGCGAGGATTGATCCTGGTTTCACAACTTTAGTTTGGCAGAAATTGGAAGAAGAGAATGCGGATTTTTTCAGAGCCTACTACATTCGGCTGAAACTGAAAAAGCAGATCATCATGTTCAATCATTTACTTGAACATCAATACCATCTTATGAAGTATCCGGTGCATCCAAAGCTTCCGCTTGCTCCCATACAAAATGGCATCCATCCCATGCCAGTTAACAACTTACCAATGGGATACCCGGTTTTACCACAACCATCAATGCCAACTACAGGCCAACCCCATATGAATGCCATGGGTATATCTAGCTGTCATGTGGTCAACGGAGTGCCTGCTCCAAGTAACTTCCATCCGATGCGTATGAACTCCGGAAATGAAAGTATGGGGATGGATACCAGTGCAGCTGATGTCGCCCCCGCTATTCCAACGAATGGGGCCATTTCACCGATATCAGATATGCCTATGAGTCCTACATCAGTGGCGTCCAGTGGCCATTTCCCTTTTACCGCGTCTGAAATATCAGGAATGGGAGTAGACACATCAGCTCTCGACACAGCTTTTACATCTGACGTGGCAAGTTCCGTAGGATTGCATCTGCCACCTGATAACGGAACTTCTAGACCGTTTGGTCATATTCCTTGGAATTTCAGCCTTTCAGATCTAACAGCAGACTTATCGAACTTGGGAGATCTAGGAGCTCTTGGAAACTATCCCGGTTCCCCCTTTCTGCCATCTGATTCAGATATATTACTTGATTCCCCCGAGCAAGAGGACATTGTGGAAGAGTTCTTTGCTGACTCTGTTCCTGGACCACCATGCTCCAATTCAGATGAAGAGAAATCCTAG 1113 45.1 MKSNQESKNKPEIQPLTTQASQESQSDQHNNNNNNNATEAPVPDSGSASISSNDNRKVSREDIELVQNLIERCLQLYMNRDEVVKTLLNRARIDPGFTTLVWQKLEEENADFFRAYYIRLKLKKQIIMFNHLLEHQYHLMKYPVHPKLPLAPIQNGIHPMPVNNLPMGYPVLPQPSMPTTGQPHMNAMGISSCHVVNGVPAPSNFHPMRMNSGNESMGMDTSAADVAPAIPTNGAISPISDMPMSPTSVASSGHFPFTASEISGMGVDTSALDTAFTSDVASSVGLHLPPDNGTSRPFGHIPWNFSLSDLTADLSNLGDLGALGNYPGSPFLPSDSDILLDSPEQEDIVEEFFADSVPGPPCSNSDEEKS 370
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00251 370 MobiDBLite consensus disorder prediction 1 57 - -
Armi1g00251 370 Pfam Plant protein 1589 of unknown function (A-thal-3526) 66 117 IPR006476 -
Armi1g00251 370 NCBIfam TIGR01589 domain 63 119 IPR006476 -
Armi1g00251 370 PANTHER OS02G0137100 PROTEIN 60 334 IPR006476 -
Armi1g00251 370 MobiDBLite consensus disorder prediction 8 54 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00251 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
19361 Armi14g01598 Armi1g00251
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr1:4566660 Armi6g00206 Armi-Chr6:3626823 dispersed
Armi Armi-Chr1:4566660 Armi14g01598 Armi-Chr14:77208982 wgd