Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Armi1g00265	ATGAATGTTGGCGATCTTCACAACGTCTGGGAAATCAGAACGTTAAAGAGGAAAGTTGGAGGAGTTGAAGCTAAGAAATTCCTTGAAAAAATCGCCAAACAGGTCCAACCGATCATGCGCAAGCATAAATGGAGGGTGAAAGTTCTATCCGAAATGTGTCCGAAAAACCCTCGTCTTCTAGGTTTAAACGTCGCCCGTGGTGTTCATGTAAAGCTAAGACTTCGAAGACCAAATACAGATTGGGATTGGTTACCTTTTGATGAAGTTCTTGATACAATGCTACATGAACTCTGTCATAACGCCATTAGTCCTCATAATGCTGCTTTCTACAAACTCTGGGATGAACTCAGAAAGGAATGTGAGCAGCTGATTAGTGAAGGAATTTCCGGGTCCGGAGGTGGGTTTGATCTTCCTGGCAGACGTTTGGGTGGATTTTCTCGTCAACCTCCTCTCTCATCTCTCCGCCAGACTGCACTTCTTGCTGCAGAAAAAAGAAAACGCCAAGGATCGCTTTTACCATCAGGACCTAAACGCCTTGGTGGTGACAAATCCATCATGTCTTCCCTAACTCCTGTACAAGCGGCTGCAATGGCTGCAGAAAGGAGACTTCAAGACGATATATGGTGTGGCCTAGAGGAAATAGTCGAGGAAGAAGAAAGTGGCGCTGGTGTCCCACAAGAGCACCAAAATATAAGAAACTCGGTGTCTTCTAGTAGTCTAGGTGCCGATACAAACGTCAAGTCTCAGAAAAGAAGTCATCAAGAAACCAATGATCTGCCATCTCGGTGCTGTGATGGTCATTCTGAACCATATTTTGTTGACTTAACCGCTGTTCCCTCAGTATCCAACGGCATATCAACTAATAAAAGAAGTCGCCAAACAGAAAAGGACGCAAATATGCCTTCATCACACGATTTTGAGAAAAGTTGTATTGATTTAACAGGTGATGATGCTTCTACTAGCAATCGAAAAACAGAATGCGACACACGGTCCTCTGGGTGGGAGTGCATGACGTGCACATTGCTGAATCCGCCTTTAGCTCCAATCTGTGAGCTATGTGGAACCCACAAACCGAAAGCTATTGAAGAGAAGTATAAGGCGTGGTCATGCAAGTTTTGTACACTGGAAAACAGCGTGAAGTTAGAGAAATGCGGAGCTTGTGGGCAATGGAGATATTCTTATGGCCAATCGATAGCAACCCCTTCGCCAAATGTGGGTACCTAA	1224	44.69	MNVGDLHNVWEIRTLKRKVGGVEAKKFLEKIAKQVQPIMRKHKWRVKVLSEMCPKNPRLLGLNVARGVHVKLRLRRPNTDWDWLPFDEVLDTMLHELCHNAISPHNAAFYKLWDELRKECEQLISEGISGSGGGFDLPGRRLGGFSRQPPLSSLRQTALLAAEKRKRQGSLLPSGPKRLGGDKSIMSSLTPVQAAAMAAERRLQDDIWCGLEEIVEEEESGAGVPQEHQNIRNSVSSSSLGADTNVKSQKRSHQETNDLPSRCCDGHSEPYFVDLTAVPSVSNGISTNKRSRQTEKDANMPSSHDFEKSCIDLTGDDASTSNRKTECDTRSSGWECMTCTLLNPPLAPICELCGTHKPKAIEEKYKAWSCKFCTLENSVKLEKCGACGQWRYSYGQSIATPSPNVGT	407

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Armi1g00265	407	ProSiteProfiles	WLM domain profile.	1	204	IPR013536	-
	Armi1g00265	407	MobiDBLite	consensus disorder prediction	248	262	-	-
	Armi1g00265	407	SMART	zf-4	332	356	IPR001876	-
	Armi1g00265	407	SMART	zf-4	366	390	IPR001876	-
	Armi1g00265	407	SUPERFAMILY	Ran binding protein zinc finger-like	330	357	IPR036443	-
	Armi1g00265	407	ProSiteProfiles	Zinc finger RanBP2 type profile.	364	393	IPR001876	-
	Armi1g00265	407	Pfam	Zn-finger in Ran binding protein and others	334	358	IPR001876	-
	Armi1g00265	407	Pfam	WLM domain	8	203	IPR013536	-
	Armi1g00265	407	MobiDBLite	consensus disorder prediction	283	308	-	-
	Armi1g00265	407	MobiDBLite	consensus disorder prediction	164	184	-	-
	Armi1g00265	407	PANTHER	DNA-DEPENDENT METALLOPROTEASE WSS1	1	406	IPR053000	GO:0005634(PANTHER)\|GO:0006281(PANTHER)\|GO:0008237(PANTHER)
	Armi1g00265	407	Gene3D	-	327	367	-	-
	Armi1g00265	407	ProSiteProfiles	Zinc finger RanBP2 type profile.	330	359	IPR001876	-
	Armi1g00265	407	MobiDBLite	consensus disorder prediction	226	247	-	-
	Armi1g00265	407	ProSitePatterns	Zinc finger RanBP2-type signature.	368	387	IPR001876	-
	Armi1g00265	407	ProSitePatterns	Zinc finger RanBP2-type signature.	334	353	IPR001876	-
	Armi1g00265	407	MobiDBLite	consensus disorder prediction	218	263	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Armi1g00265	K22685	DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Armi	Armi-Chr1:4742214	Armi2g00034	Armi-Chr2:663734	dispersed