AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00297 ATGGCAAACAACAAGAGTTTGATTTGCATCATTTTGGCAACATTTGGTGTTTTAGGTGCAATTTCACAAGTGAAAGGTTATTCAAGCGTTTATTGTGGCCCTTACTCCCGTTGCGAACACCAAACCCTCTATTGCCCGTCGGAATGCCCCTCCAGTGAATCTAATGAACCCAAGGCTAAGGTTTGCCGGATCGACTGCTATTCCCCTAAATGCAAGGCCGAATGCAAACAACGTAAGCCAAACTGCAACAGCCCGGGATCAGCATGCTACGACCCACGTTTCATCGGTGGAGACGGCATCGTGTTCTATTTCCACGGCAAGGTTAACCAGCATTTCAGTTTAATCTCAGACACTAACCTCCAAATCAATGGTCGTTTCATCGGCCACCGACCCACAGGCCGAACCCGGGATTTCACTTGGATCCAAGCCCTAGGTCTCCTCTTCAATTCCCATACTTTCTCACTAGAAGCCACCAAATCCGCCACGTGGGACGGCGGACTCGACCATCTCAGATTCTCCTACGACGGCGAAGAGATTTCGCTACCTGTCGGCGGGTTATCCACGTGGCAGTCTCGTGAGGACGGCATCAAAGTGGAGCGAACTTCCGGGGCGAACAGCGTGATGGTGACTATACCGGGAGTGGTGGAGATTTTGGCGAATGTGGTGCCGGTTACGTCGGAAGACGACAAGATCCATGGCTACAAAGTGCCTTCTGATGATTGTTTTGCGCATTTGGAAGTTCAGTTCAGGTTTAGCGGGCTTTCGGACGAGGTGGAAGGTGTGTTGGGGAGGACGTATCGACCGGATTTCAAGAATCCCGCGAAGCCGGGTGTGGCGATGGCGGTTGTGGGAGGAGAAGACAAGTTCAAAACCACGTCTTTGTTGGCGGCGGATTGCGCGACGTGCGTATTCGATTCGAGCAACGTAGCGGCGGAAGAGGAGCGGAAGACAAGGAAGGAGTATGGGACTTTGGATTGCTCCAACAAGGGATTGTTCCATGGAAATGGAATTGTTTGCAAGAAGTGA 1026 51.46 MANNKSLICIILATFGVLGAISQVKGYSSVYCGPYSRCEHQTLYCPSECPSSESNEPKAKVCRIDCYSPKCKAECKQRKPNCNSPGSACYDPRFIGGDGIVFYFHGKVNQHFSLISDTNLQINGRFIGHRPTGRTRDFTWIQALGLLFNSHTFSLEATKSATWDGGLDHLRFSYDGEEISLPVGGLSTWQSREDGIKVERTSGANSVMVTIPGVVEILANVVPVTSEDDKIHGYKVPSDDCFAHLEVQFRFSGLSDEVEGVLGRTYRPDFKNPAKPGVAMAVVGGEDKFKTTSLLAADCATCVFDSSNVAAEEERKTRKEYGTLDCSNKGLFHGNGIVCKK 341
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00297 341 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 28 341 - -
Armi1g00297 341 Pfam Root cap 248 304 IPR009646 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00297 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr11:19212421 Armi1g00297 Armi-Chr1:5277843 dispersed
Armi Armi-Chr1:5277843 Armi1g00300 Armi-Chr1:5350635 dispersed
Armi Armi-Chr1:5277843 Armi1g00298 Armi-Chr1:5293272 tandem