AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00310 ATGGCGGCCATCTTATCCTTCGCTACATCTCCGTCTAATTTCAGAGTGATTAATAATTCAAGTAGAACATCAGTTCCATTGCAGTCAAGTTCTCGAATCTCCATAACCAGTCACCATCAACATTCTGCTAATTTGTTTGTTCCTGAGGTCGAAAGTGCAGTTGATACCTTGTATCCAGAGTTCAGGGTGGTGGATAATCTTGTGGCACGCAATACATCTCGAGTTCTTAAAGCTTTTCAGAATGCCAGGGTCGGATCTCATCACTTCAGTGGTTGCACTGGTTATGGCCATGAAGAAGCCGGGGGTCGTGAGGCCCTCGACCAAGCTTTTGCAGAAATTTTTGGTGCTGAATCTGCAATCGTTCGATCACAGTTCTTTTCAGGCACTCATGCTATTACCTGTGCCCTGTTTGCTTTCTTAAGGCCGGGCGACGAGCTTTTGGCAGTTGCTGGTGCTCCTTATGATACACTGGAGGAGGTTATAGGAATCAGGGATGGAAATGGATCGGGTTCCCTGAAAGATTTCGGAATCAACTATCGAGAAGTTGCACTTGCAGATGATGGAGGACTTGATTGGGATGCTCTTGAGGTCGCTTTGAGACCTCAAACAAAGTGTGCCCTCATACAAAGATCATGTGGGTATTCTTGGCGTCGAAGTTTAAGTGTGAACGAAATATCAAGGGCAATAAACATGATCAAGAAACAAAATCCAAATTGTATGGTTATGGTGGATAACTGCTATGGTGAATTCACAGAAGCCATTGAACCTCCTATGGTGGGTGCAGACCTTATTGCAGGAAGTTTAATTAAAAATCCAGGTGGAACGATTGCACCCTGTGGTGGATACGTTGCAGGTAAAGAAAAATGGGTAAAAGCAGCAGCAGCTCGCCTCTCGGCACCAGGCCTTGGGGTCGATTGTGGCTCAACTCCTGGTGACATTATGAGAACATTCTTTCAGGGATTATACCTCTCACCTCAAATGGTTGGGGAAGCAATTAAGGGAGGCTTATTGATCGCTGAAGTTATGTCCACAAAAGGTTACAAGGTCCAGCCACTTCCACGAGTTCCACGTCACGACATAGTACAGGCCGTACAACTGGGAAGCCGTGAAAAGCTCCTTGCTTTCTGTGAAGCCGTACAAAGAAGCTCCCCAGTAAGCTCTTATACCAAACCGATTGCAGGTTCAACAGCTGGCTATGCATCGGAGGTGATCTTTGCTGATGGCACATTCATAGATGGCAGCACAAGTGAGCTCTCGTGTGATGGACCGTTAAGGGAGCCATTCTGCGTTTTCTGTCAGGGTGGTACTCACTGGACTCAGTGGGGATTAGTTCTAGGTGAAGTTTTGAAGTCGTTGTAG 1359 46.28 MAAILSFATSPSNFRVINNSSRTSVPLQSSSRISITSHHQHSANLFVPEVESAVDTLYPEFRVVDNLVARNTSRVLKAFQNARVGSHHFSGCTGYGHEEAGGREALDQAFAEIFGAESAIVRSQFFSGTHAITCALFAFLRPGDELLAVAGAPYDTLEEVIGIRDGNGSGSLKDFGINYREVALADDGGLDWDALEVALRPQTKCALIQRSCGYSWRRSLSVNEISRAINMIKKQNPNCMVMVDNCYGEFTEAIEPPMVGADLIAGSLIKNPGGTIAPCGGYVAGKEKWVKAAAARLSAPGLGVDCGSTPGDIMRTFFQGLYLSPQMVGEAIKGGLLIAEVMSTKGYKVQPLPRVPRHDIVQAVQLGSREKLLAFCEAVQRSSPVSSYTKPIAGSTAGYASEVIFADGTFIDGSTSELSCDGPLREPFCVFCQGGTHWTQWGLVLGEVLKSL 452
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00310 452 Pfam Methionine gamma-lyase 51 450 IPR009651 -
Armi1g00310 452 Gene3D - 46 97 - -
Armi1g00310 452 SUPERFAMILY PLP-dependent transferases 70 448 IPR015424 -
Armi1g00310 452 Gene3D - 98 306 IPR015421 -
Armi1g00310 452 PANTHER CYS OR MET METABOLISM PYRIDOXAL-PHOSPHATE-DEPENDENT ENZYME 21 452 IPR009651 -
Armi1g00310 452 Gene3D - 307 452 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00310 - -