Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Armi1g00338	ATGGCTCTTCACGCCACCTCTTTCTCCGTTCACGATCTTGTAAACTTGCCGGCGAAGACCGCCGCTGCCGCATCCTCTAAAGATTCCGGCATCTTTGGGGTTTCACTTTCCGACCACCGGAAAGTTGGTTTCAGTTCGTCATTGTCATCAAGAAGCAAGTTGGAATTTACTCGAAAAAGGGTGTTCAAAACCCAAGCGGTAGCCACCGCGACTCCGACGGTGATCCAAGCTACACCGGAGGGGAAGAAAACATTGAGAAAGGGAAGTGTGATCATCACCGGAGCTTCGTCCGGTTTGGGTCTAGCGACGGCGAAAGCTTTGTCGGAAACCGGAAAATGGCATGTGATCATGGCTTGCCGAGACTTTCTCAAAGCCGAAAGAGCCGCAAAATCTGCCGGAATGTCGAAAGAGAATTACACCGTGATGCATCTAGACCTTGCGTCTCTCGACAGCGTCCGGCAATTTGTCGGAAACTTCAAACAATCCGGCCGACCACTCGACGTTTTGGTCTGCAACGCGGCCGTGTACCGGCCGACGGCTAAAGAACCCACCTTTACCGCCGACGGGATCGAGCTCAGCGTCGGGACAAATCATCTCGGTCACTTTCTTCTTTCAAGATTGTTGCTTCATGACATGAAGCAATCTGATTACCCATCAAAGAGGCTCATCATCGTCGGCTCGATCACCGGAAACACCAACACTTTGGCCGGAAATGTGCCTCCGAAGGCGAATTTAGGGGACATGAGGGGTCTTGCGGGAGGTTTGAACGGGCTAAACAGCTCCACGATGATCGATGGCGGAGATTTCGATGGTGCAAAAGCATATAAAGATAGCAAGGTGTGTAATATGCTCACAATGCAGGAGTTTCACCGACGATATCACGAAGATACCGGAATTACGTTTGCGTCGTTGTATCCCGGCTGCATCGCCACCACCGGCTTGTTCCGGGAACACATTCCGCTTTTCCGGCTACTGTTTCCTCCATTCCAGAAGTTCATCACCAAAGGCTACGTCTCCGAAGAAGAATCCGGCAAGAGACTTGCACAGGTTGTGAGTGATCCAAGCTTGACGAAGTCGGGTGTATACTGGAGCTGGAACAAGGACTCGGCTTCGTTCGAGAACCAGTTGTCTGAAGAAGCAAGTGACGTGGCCAAGGCTCGGAGGGTGTGGGAGATAAGCGAGAAACTTGTGGGGTTGGCTTGA	1203	51.79	MALHATSFSVHDLVNLPAKTAAAASSKDSGIFGVSLSDHRKVGFSSSLSSRSKLEFTRKRVFKTQAVATATPTVIQATPEGKKTLRKGSVIITGASSGLGLATAKALSETGKWHVIMACRDFLKAERAAKSAGMSKENYTVMHLDLASLDSVRQFVGNFKQSGRPLDVLVCNAAVYRPTAKEPTFTADGIELSVGTNHLGHFLLSRLLLHDMKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDMRGLAGGLNGLNSSTMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRYHEDTGITFASLYPGCIATTGLFREHIPLFRLLFPPFQKFITKGYVSEEESGKRLAQVVSDPSLTKSGVYWSWNKDSASFENQLSEEASDVAKARRVWEISEKLVGLA	400

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Armi1g00338	400	PRINTS	Glucose-ribitol dehydrogenase family signature	164	175	IPR002347	-
	Armi1g00338	400	PRINTS	Glucose-ribitol dehydrogenase family signature	89	106	IPR002347	-
	Armi1g00338	400	PRINTS	Glucose-ribitol dehydrogenase family signature	297	314	IPR002347	-
	Armi1g00338	400	CDD	LPOR-like-SDR-c-like	87	399	-	-
	Armi1g00338	400	NCBIfam	protochlorophyllide reductase	86	400	IPR005979	GO:0016630(InterPro)
	Armi1g00338	400	Pfam	short chain dehydrogenase	90	233	IPR002347	-
	Armi1g00338	400	PANTHER	PROTOCHLOROPHYLLIDE REDUCTASE C, CHLOROPLASTIC	1	400	IPR005979	GO:0016630(InterPro)
	Armi1g00338	400	Gene3D	-	75	400	-	-
	Armi1g00338	400	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	85	368	IPR036291	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Armi1g00338	K00218	protochlorophyllide reductase [EC:1.3.1.33]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Armi	Armi-Chr1:6191366	Armi5g01442	Armi-Chr5:34628583	dispersed
	Armi	Armi-Chr17:51359294	Armi1g00338	Armi-Chr1:6191366	transposed
	Armi	Armi-Chr1:6191366	Armi14g01472	Armi-Chr14:73930158	wgd