AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00353 ATGAGAGGACCCTTAGGTTCAGTGATTGGTAAATACCCATCAAGTGATGGAAATGGTGAACAGGGTGGTGCAAATGGGATCATAAAACACAACAGAAAATGCAGAGATATTGTGTTTCTTGTTTTCTTCGTAGCTTTCTGGATCGCCATGATTGTTAACTCAAGTTTCGGCTTCAATCAAGGAAACCCATTGAGGCTAAACTTCGGGTTGGATTATAAAGGAAACGTATGTGGGGGCAAACACGCAGATTTCGACCTCCGACAATTGGAACTCAAATATTGGGTTAATCCTAACCAAGTTTACCAAAGCGGATTGAAAAACAGCCAAATAAAACTATCTAACGCTCGGACCATTTGCTTGTTGGATTGTCCCATACCATCGGAAGATTCTCTGAATTGGGTTTGTGATTATCCGGAGGGCGATCTTCGTCTTTCGTTAGATGATTGGATCGATATGAACTACGATTATTTTGCTGATCTTACGCCTGAACTAAGGAATACTTCCCTTCAACTTCAAGGTCCTTGTTACCCGGTTATATTTCCAAGCGTAAACGTTTATTGGAGCTGCCAGTTTATTGCACGCCCGTCGAATGTGTCTTTAACACATTGGAAGCAAATGAATGGTGTTACGATTGCCGATGATATGGTCATAGATAAATCTATTCACAAGTCCATTAACTCACGGTCGTCGGTGTTGAAGAGATACGTGGCTGATGTCGGAAAGTCATGGCCCGTGTTGATTGTTTGTGGAGGATTCCTGCCTCTATTTCTATCGTTGCTATGGCTTTTGATGATCCGACATTTTGTAAGCGGAATGCCGTGGGTTACAGTCTTTCTCTTTAATGGCCTCATAATATCCGTCACAATGTTCTACTACATGAAAGCTGGATGGTTTGGAAACGATGCTATCTCACCCATCATCGGTCAACACGATCCATACTATCATGTTTCTGCAAGGGAGCAACATCATATCCGTGCTGCTGCTTTTCTCATGACTTGTGTGATGATTGTTGCTGTTCTATCATCTATAGCTATTGTTCGTCGGATTCTTATGGCATCCTCGGTACTCAAGGTTGCTGCAAAGGTCATCGGTGAAGTTCAGGCTCTCATAATATTCCCGGTCATTCCATACGTAATCCTTGCAATCTTTTACATGTTCTGGTTGTCGGCCGCTCTCCATCTTTTCAGTTCCGGTCAGATCGTCCGCAACGATTGCAACACGAATTGCTGTGCATACGATCTCAAAGCCAAAAGGGTCAGTTGTGACGATTGCTGCGGCTATAGCATCCGTTACACCTCTCATATCGCAGCTTCGATCCTATTCCACCTGTTCGGATGCTATTGGGCCACTCAGTTTATCATAGCATGCTCTTCAACCGTGATTGCTGGTTCCGTAGCTTCCTACTATTGGGCTCGTGGGGAAACTTCGACGGCGATTCCGTTTCTTCCGGTTTTCTCCTCGATGAAGCTACTCACGCGCTACAGCCTTGGCTCTGTGGCAATCGGTTCGTTGATTGTGTCTTTTGTTGAGTCGACTCGGTTCATACTCGAGGCCATACGTCGTAGATTGAAAGTTGCTGATATTCTGCCGGAAAGCTGGATTAAGAGGATGATGTTCTATACTTCTCGGTTTTGCTTGAAGTGTATTGAATTGACCATAAAATCCGTAAACCGCAATGCATACATTATGATTGCTATTACGGGCAAAGGTTTTTTCCGAGCTTCTGAGATGGCAACGGAGTTGATCATTAGTAACATTCTCCGTATAGGCCGAGTGAATGTCATCGGGGACGTTATTCTCTTTCTTGGCAAGCTATGTGTCAGCCTCGCGAGTGCGCTTTTCGCATTCCTCATGTTGGACACTCACAAATACAAATCATCTCACAACAAGATCACATCCCCACTATTTCCTGTGCTGGTGTGTTGGGGTTTGGGATACATAGTCGCTACACTGTTCTTTGCGGTGGTGGAAATGTCGATCGATACGATCATCCTTTCGTATTGCCAGGATGCTGAGGAACACCAAGGAACAGCACATTATGCTCCTCCACTTTTGATTGAAACCTTTGATGAACAAAATGAGGTGCAAAGAATTGGACAATGA 2103 44.17 MRGPLGSVIGKYPSSDGNGEQGGANGIIKHNRKCRDIVFLVFFVAFWIAMIVNSSFGFNQGNPLRLNFGLDYKGNVCGGKHADFDLRQLELKYWVNPNQVYQSGLKNSQIKLSNARTICLLDCPIPSEDSLNWVCDYPEGDLRLSLDDWIDMNYDYFADLTPELRNTSLQLQGPCYPVIFPSVNVYWSCQFIARPSNVSLTHWKQMNGVTIADDMVIDKSIHKSINSRSSVLKRYVADVGKSWPVLIVCGGFLPLFLSLLWLLMIRHFVSGMPWVTVFLFNGLIISVTMFYYMKAGWFGNDAISPIIGQHDPYYHVSAREQHHIRAAAFLMTCVMIVAVLSSIAIVRRILMASSVLKVAAKVIGEVQALIIFPVIPYVILAIFYMFWLSAALHLFSSGQIVRNDCNTNCCAYDLKAKRVSCDDCCGYSIRYTSHIAASILFHLFGCYWATQFIIACSSTVIAGSVASYYWARGETSTAIPFLPVFSSMKLLTRYSLGSVAIGSLIVSFVESTRFILEAIRRRLKVADILPESWIKRMMFYTSRFCLKCIELTIKSVNRNAYIMIAITGKGFFRASEMATELIISNILRIGRVNVIGDVILFLGKLCVSLASALFAFLMLDTHKYKSSHNKITSPLFPVLVCWGLGYIVATLFFAVVEMSIDTIILSYCQDAEEHQGTAHYAPPLLIETFDEQNEVQRIGQ 700
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00353 700 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 25 693 IPR007603 GO:0022857(InterPro)|GO:0055085(InterPro)
Armi1g00353 700 Pfam Plasma-membrane choline transporter 330 672 IPR007603 GO:0022857(InterPro)|GO:0055085(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00353 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr15:71608319 Armi1g00353 Armi-Chr1:6437193 dispersed