AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00358 ATGACTGGAGTGTCATTGGATTCAAGAGCACAGAGTTATGGATCGCCACAGCAGCCACAGAATGGTTCATTGCAGACTCAAAATGGGTTTATTGTGCGCAAGCCTTCAAGGATGTCGCTATCTGGTTCGAGGGAGAAGGATAAATTTCTTCCCTTTTTGTGGAGATATCTAAGTAGGAAGAAGGTTGTAATGCTGATTTTAGGTTCATTTGCGGTCGTGGCTTTCTTGACAGGGTTCTTTACGGTCAATAGAGAAGATGCATCAGAGAGCACGATCTTCGATCATTTTAGTGAGGCATACAATACGTCATTACAGTTCTCCAGAAAATTTGGTAGTCAGCAAGACAATAATTCTTCCATGCAGACAACTCTGGCTGTATGCGAAGAAAATCCACCTACTAGCCATTTTTTTGCTGCATCACTTTCTACAGAATCCGTCTTTCCTCGTAGCAATTTGTGTCAGAATTTTGCATTTCCTCCTCCTCCTCCAGGTGATAGGAGACGGCCTGGACCTCGACCTTGTCCTGTATGTTACCTTCCCGTGGAGCAGGCTATAGCTAGCATGCCGAGATCCCCTTCAACCTCGCCGGTGCTTCATCACTTAACTTATTTTCATGAGGAGAGTTCTACTAAAACTGAACCACATGAAGGTTCCGACTTTGGTGGGTATCCTTCCCTAAAGCAAAGGAATGAATCTTTTGATATTAAAGAATCAATGACTGTGCATTGTGGGTTTGTAAAAGGATGCAGACCTGGTTACCAAACTGGATTCGATATTGATGTATCTGATCTTGTGGAGTTGGAGCAGTTTCATGAGATCATTGTTGCATCAGCCATATTTGGAAACTATGATGTAATTCAACAGCCAACTAAGATTAGCGAGGCTGCAAGTAGAAACATCCCATTCTATATGTTTATTGATGAAGAGACTGAAGCATATATGAGAAACTCTAGTGTTTTGGACTACAAAATGAAGGTTGGATTGTGGAGAATTATTGTTGTGCATAACATTCCTTACTCCGATTCTAGACGCAATGGAAAGGTTCCAAAGCTTCTGCTACACAGGCTCTTTCCAAATGTTCGGTATTCTATATGGATTGACGGGAAGCTGCAACTTGTTGTGGACCCATATCAAGTTCTTGAGAGGTTCTTGTGGCGCCACAATGCTACTTTTGCTATTTCAAAACATTATAGGCGCTTTGATGTGTTCGTAGAAGCTGAAGCTAATAAGGCTGCAGGGAAATACGACAATGCCTCCATTGATTACCAGATTGATTTTTACAGAACTGAGGGTTTAACACCTTATTCTGAGGCCAAGCTTCCTATAATCAGTGATGTTCCTGAAGGGTGCGTCATCATAAGGGAACACATTCCGATAACAAATCTCTTCACATGTTTGTGGTTCAATGAAGTTGATCGGTTTACTTCGAGGGATCAGTTGAGCTTTGCTACTGTAAGGGACAAAATCATGGCTCAAGTTAACTGGAGCGTCAACATGTTTCTGGATTGTGAAAGACGAAACTTTGTGATACAGGCGTACCACCGAGATCTATTAGAGCACATGCCACCACCTGCAAGAACAACGAGTAACTTAAAACGTAGCCGAATTCCTGTTCCGGTTCCTATATCTGTGCGAGTTAATTCATCTGCTAGGAATTTCACAAAGAAAAACCCTGTTCGACGTGGGAAAGGAGAGAGGAGATCTCGGTCGAGGAGGCACCCGAAAAATCCCAGTAATAGGGACAACACGTTCTTTTTTTGA 1761 42.48 MTGVSLDSRAQSYGSPQQPQNGSLQTQNGFIVRKPSRMSLSGSREKDKFLPFLWRYLSRKKVVMLILGSFAVVAFLTGFFTVNREDASESTIFDHFSEAYNTSLQFSRKFGSQQDNNSSMQTTLAVCEENPPTSHFFAASLSTESVFPRSNLCQNFAFPPPPPGDRRRPGPRPCPVCYLPVEQAIASMPRSPSTSPVLHHLTYFHEESSTKTEPHEGSDFGGYPSLKQRNESFDIKESMTVHCGFVKGCRPGYQTGFDIDVSDLVELEQFHEIIVASAIFGNYDVIQQPTKISEAASRNIPFYMFIDEETEAYMRNSSVLDYKMKVGLWRIIVVHNIPYSDSRRNGKVPKLLLHRLFPNVRYSIWIDGKLQLVVDPYQVLERFLWRHNATFAISKHYRRFDVFVEAEANKAAGKYDNASIDYQIDFYRTEGLTPYSEAKLPIISDVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQLSFATVRDKIMAQVNWSVNMFLDCERRNFVIQAYHRDLLEHMPPPARTTSNLKRSRIPVPVPISVRVNSSARNFTKKNPVRRGKGERRSRSRRHPKNPSNRDNTFFF 586
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00358 586 MobiDBLite consensus disorder prediction 547 586 - -
Armi1g00358 586 MobiDBLite consensus disorder prediction 556 574 - -
Armi1g00358 586 Pfam TOD1-MUCI70, glycosyltransferase-like domain 201 514 IPR048354 -
Armi1g00358 586 PANTHER ALKALINE CERAMIDASE-RELATED 37 543 IPR006852 -
Armi1g00358 586 MobiDBLite consensus disorder prediction 1 28 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00358 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr11:15023500 Armi1g00358 Armi-Chr1:6470246 dispersed
Armi Armi-Chr1:6470246 Armi3g04415 Armi-Chr3:158391109 dispersed
Armi Armi-Chr1:6470246 Armi15g01368 Armi-Chr15:71433400 transposed