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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00364 ATGGAAATCATCTCAATACAACCCGAAACCGAAAACCCATCTCCGGTCAACTCTCCGTCAAGCAACGGCAGCAGTAGCAACAGCAACGGCGCCGTCAAAACACCACCACTAACTCCAAGACCGGTTTCAAGATCCGAACCAAATCCATACCCAACAACCTTCGTTCAAGCCGACACAACTTCCTTCAAACAAGTAGTCCAGATGCTAACCGGATCATCCAAACCGACCCAAGATCCGACTCCGTCGTCAAAGATATCCATACCGCCGATCAAAACGGGTCAACAGAAAAAACCGGGTTTCAAGCTCTACGAACGTCGGAACAGTTTGAAAAACGGGCTCATGATTAACCCGTCGGTGCCGAAGTCCGTCAACGGACATGGGTTCTCGCCGAGAATCCATGAAATACTTTCGCCGAGCATTCTTGATTTTCCGGCGCTCGTTCTTAGTCCGGTGACGCCGTTGATCGAAGACCCGTTTAGTAAATCGTCGCCGTCGATTGGGAATTCGTCGTCGTCGGAGGAAGAAAGGGTGATTGCGGCAAAAGGGTTTTATTTGCATCCGTCGCCTAGGGCGGCGACGCCGTACGGGACGGCGGAGCCACAGTTGTTGCCTCTTTTTCCGGTGACGTCGCCGCGGGTGTCGGAATCGTCGATTTAG 657 52.36 MEIISIQPETENPSPVNSPSSNGSSSNSNGAVKTPPLTPRPVSRSEPNPYPTTFVQADTTSFKQVVQMLTGSSKPTQDPTPSSKISIPPIKTGQQKKPGFKLYERRNSLKNGLMINPSVPKSVNGHGFSPRIHEILSPSILDFPALVLSPVTPLIEDPFSKSSPSIGNSSSSEEERVIAAKGFYLHPSPRAATPYGTAEPQLLPLFPVTSPRVSESSI 218
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00364 218 MobiDBLite consensus disorder prediction 47 90 - -
Armi1g00364 218 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 24 214 IPR039611 -
Armi1g00364 218 Pfam VQ motif 49 74 IPR008889 -
Armi1g00364 218 MobiDBLite consensus disorder prediction 1 99 - -
Armi1g00364 218 MobiDBLite consensus disorder prediction 7 34 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00364 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
20197 Armi1g00364 Armi8g02582
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr11:13776496 Armi1g00364 Armi-Chr1:6539153 dispersed
Armi Armi-Chr12:3415635 Armi1g00364 Armi-Chr1:6539153 dispersed
Armi Armi-Chr15:71246534 Armi1g00364 Armi-Chr1:6539153 dispersed
Armi Armi-Chr1:6539153 Armi2g00357 Armi-Chr2:7024912 dispersed
Armi Armi-Chr1:6539153 Armi8g02582 Armi-Chr8:95005501 wgd