Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Armi1g00425	ATGACGATGGCTGCTACTGCTTTCTTTTGCTTCCTCATGATCTTCTTTTGCTTCATCTCCGAAGCCACTGTTCCTCCCTCCGACACCTTCCGATACGAAAACTCCGGCGGATACGGAGATTCCGATGAAGTCCAGACCGAATACGACCCAACCTACCGTCCTCTTCCTCAATTCACTTCCCCTTTCCAGCTCTGTTTCTACAACACCACCCCCAATTCGTACACTCTTGGTCTACGCATGGGGACCCGACGTTCCAGATCCCTCATGCGTTGGGTCTGGGACGCCAACCGGGGCAATCCGGTTCGCGAAAACGCGACTCTCTCCTTTGGCACCGAAGGAAACCTGGTCTTGGCCGATGTAGACGGCCGGATCGTATGGCAGACCAACACCGCCAATAAGGGCGTCGTTGGGTTCGCCATACTCCCAAATGGTAACATCGTGCTTCGTGACGCTAAGGGTAATTTCGTCTGGCAAAGCTTTGATTCCCCAACCGATACCCTCTTGTTCGGCCAGAGCCTCCGGATCGGAGGTCCGAATAAGCTCGTGAGCAGGGCTTCCACCACGGAAAACGTTAACGGCGTCTATAGTTTCGTATTAGAGCCGAAAAGATTGGCTTTGTATTACAAGAACATGCGTTACTGGTCATCCTCCTTTACCGATGTCAACAAGGCCAATGGGAATTTGGTTAATGCAACGTTAGAAATTGTGGAAGCTGAATATTCCGATAGCAATTATAACGCAATCCTGTGCCGTCAATCCAACGGGGGAACACCGTTTATACTTCTCGACATACTCAGCTACAACAGCACGTTATCGTATCTCCGGTTGGGGATCGATGGGAACCTAAGACTGTACAGTTATCGTCAAAATTCGAATGCAGCCGCGTGGAGCCTGTTGTTCACTTTGTTGGATAGAGGGGTGAGCGAGAGGGGGGAGGAGATCGAAGACGAGTGCCAATTGCCCGATCGATGCGGTAAGTTTGGGCTTTGTGAGGACAGCCAATGCGTTGGATGCCCAACACCGAACGGTGTTTTTGCATGGAGCAAAGATTGCATTGCAAAGTTACCGGGATGTCAGGCGAGTAGTTTTCGTTATTACGAGCTCAAAGGGGTGGACCATTTCACGGTGAAATACAGTGCAGGGACGGGTCCGGTGAATCGGAAGGATTGCGAGAGCAAATGCACCAAGGATTGCAAGTGCTTGGGGTATTTCTATCACACAGATCGATCGAGATGCTGGATCGCCAACGAGTTGAAAACGTTGACGAGAGTTGGGAATTCGACTCATGTGGCATACATCAAAAAGCCCATATGA	1314	50.61	MTMAATAFFCFLMIFFCFISEATVPPSDTFRYENSGGYGDSDEVQTEYDPTYRPLPQFTSPFQLCFYNTTPNSYTLGLRMGTRRSRSLMRWVWDANRGNPVRENATLSFGTEGNLVLADVDGRIVWQTNTANKGVVGFAILPNGNIVLRDAKGNFVWQSFDSPTDTLLFGQSLRIGGPNKLVSRASTTENVNGVYSFVLEPKRLALYYKNMRYWSSSFTDVNKANGNLVNATLEIVEAEYSDSNYNAILCRQSNGGTPFILLDILSYNSTLSYLRLGIDGNLRLYSYRQNSNAAAWSLLFTLLDRGVSERGEEIEDECQLPDRCGKFGLCEDSQCVGCPTPNGVFAWSKDCIAKLPGCQASSFRYYELKGVDHFTVKYSAGTGPVNRKDCESKCTKDCKCLGYFYHTDRSRCWIANELKTLTRVGNSTHVAYIKKPI	437

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Armi1g00425	437	PIRSF	SLG	1	437	IPR035446	-
	Armi1g00425	437	CDD	B-lectin	46	163	IPR001480	-
	Armi1g00425	437	SUPERFAMILY	alpha-D-mannose-specific plant lectins	72	215	IPR036426	-
	Armi1g00425	437	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5	54	434	IPR051343	-
	Armi1g00425	437	SMART	blect-4	46	163	IPR001480	-
	Armi1g00425	437	ProSiteProfiles	Bulb-type lectin domain profile.	43	161	IPR001480	-
	Armi1g00425	437	CDD	PAN-AP-plant	361	434	-	-
	Armi1g00425	437	Gene3D	-	57	161	IPR036426	-
	Armi1g00425	437	ProSiteProfiles	PAN-Apple domain profile.	358	437	IPR003609	-
	Armi1g00425	437	Pfam	D-mannose binding lectin	92	175	IPR001480	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Armi1g00425	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Armi	Armi-Chr1:7768574	Armi1g00425	Armi-Chr1:7983759	dispersed
	Armi	Armi-Chr1:7858665	Armi1g00425	Armi-Chr1:7983759	dispersed
	Armi	Armi-Chr1:7983759	Armi16g00025	Armi-Chr16:1026994	dispersed
	Armi	Armi-Chr1:7932087	Armi1g00425	Armi-Chr1:7983759	proximal