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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00429 ATGGACTTCCAACGATTCTACGAAATATGGTACGATCAACTCCACCACCACATCCACCACCTCACCAAGGCCCCACGCCCACCCACCACCGACGACCACCACCACCAACTCACCCGACTCGTCAACAAAGTCATGTTCCACTTCTCCGAGTACTACCGAGTCAAGTCACTCGCCGCCAACCAAGATGTTCTTTCCATCTTCTCTGCACGGTGGTCAACCACCCTTGAACGGTCACTCCACTGGATTGCTGGGTGGCGACCCACCACCGCCTTCCATCTTATCTATACTGAATCCAGTATCCTTTTTGAGTCACGCATACTTGATATCCTCCATGGTATCCGTACCGGAGATCTTGGTGACCTCTCGCCGGCGCAGTTTACTGGTGTTAGTGAGTTGCAGTGTGAAACTGTTCAACAAGAGAACGTCATCACGGATCAGCTGTCGGAGTGGCAGCAGGATGAGGCGAGTGCGTTAATCGGCGGGACGTGTGTAGATTTAGATAAGAAGATTGAAGGGTTGGTGAAGATCGTGAAGAAAGCCGATGAGTTGCGATTGCGGACGTTGAAGGCGGTGGTGGAGCTACTGACACCGCAGCAGGCGGCGGAGTTCCTGATCGCGGCGGCGCAGTTGCATTTTGGAATCCATAGATGGGGTTTAGATCATGATCGTGAACGTGCTGAGAAATAA 687 52.55 MDFQRFYEIWYDQLHHHIHHLTKAPRPPTTDDHHHQLTRLVNKVMFHFSEYYRVKSLAANQDVLSIFSARWSTTLERSLHWIAGWRPTTAFHLIYTESSILFESRILDILHGIRTGDLGDLSPAQFTGVSELQCETVQQENVITDQLSEWQQDEASALIGGTCVDLDKKIEGLVKIVKKADELRLRTLKAVVELLTPQQAAEFLIAAAQLHFGIHRWGLDHDRERAEK 228
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00429 228 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 2 226 IPR051886 -
Armi1g00429 228 ProSiteProfiles DOG1 domain profile. 1 224 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Armi1g00429 228 Pfam Seed dormancy control 18 96 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00429 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
20232 Armi1g00429 Armi8g02517
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr1:8169883 Armi9g01195 Armi-Chr9:24111937 dispersed
Armi Armi-Chr1:8169883 Armi8g02517 Armi-Chr8:93679508 wgd
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Armi1g00385 ACH 1 307 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 56.037 1.58e-101 299.0
Armi1g00429 ACH 112 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06960 26.577 4.47e-17 77.0
Armi1g00871 ACH 38 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 55.814 9.08e-43 137.0
Armi1g01049 ACH 1 431 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G19290 46.389 6.54e-96 292.0
Armi1g01568 . 121 298 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G44080 46.114 5.61e-36 128.0
Armi1g01697 ACH 211 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 54.444 5.59e-24 99.4
Armi1g03139 . 32 162 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 58.333 4.27e-47 149.0
Armi1g04466 . 12 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 53.571 1.25e-100 297.0
Armi1g04930 . 1 143 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G62420 54.545 5.39e-54 165.0
Armi2g01280 ACH 9 165 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 51.899 1.28e-45 145.0
Armi2g01601 ACH 21 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 53.846 2.30e-121 357.0
Armi2g03065 ACH 1 367 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 55.814 1.10e-118 346.0
Armi2g03426 . 7 315 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G44080 45.625 8.90e-63 200.0
Armi3g00520 ACH 26 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 58.621 1.10e-43 142.0
Armi3g00819 . 1 155 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G16770 40.625 8.67e-29 104.0
Armi3g00990 ACH 1 382 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 47.962 4.73e-104 310.0
Armi3g01763 . 1 327 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 47.175 1.69e-89 268.0
Armi3g02887 ACH 1 347 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 56.077 8.18e-112 327.0
Armi3g03961 ACH 23 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 41.667 1.11e-30 108.0
Armi4g00006 . 43 218 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G42990 40.659 1.15e-17 79.7
Armi4g00256 . 63 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 36.087 1.37e-25 97.4
Armi4g00817 . 147 468 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G19490 33.238 8.92e-36 135.0
Armi4g01069 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 76.435 1.63e-180 500.0
Armi4g01196 . 21 339 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 70.062 3.50e-147 422.0
Armi4g02702 ACH 15 155 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G49760 41.104 7.59e-32 111.0
Armi4g03657 . 190 295 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 43.396 4.90e-17 78.6
Armi4g04298 ACH 1 367 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 55.44 3.56e-112 329.0
Armi5g00571 . 1 372 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 63.613 5.44e-158 449.0
Armi5g00694 . 247 333 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 38.298 2.53e-09 51.2
Armi5g00695 . 210 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 58.163 8.73e-26 96.7
Armi5g01597 ACH 12 517 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 50.912 4.71e-140 414.0
Armi5g01675 ACH 1 240 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G16770 57.854 4.30e-94 275.0
Armi5g02360 . 4 452 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G68640 59.1 3.85e-167 477.0
Armi5g02447 ACH 68 169 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G13600 62.136 2.41e-36 122.0
Armi5g02455 ACH 29 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 53.205 1.11e-41 137.0
Armi6g00520 . 1 481 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G08320 60.895 0.0 575.0
Armi6g01034 . 1 153 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G11260 71.242 4.24e-57 174.0
Armi6g02429 . 21 339 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 67.059 1.81e-150 431.0
Armi6g02504 . 121 318 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 27.66 1.06e-18 82.8
Armi6g02618 . 147 469 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G19490 34.545 5.62e-32 124.0
Armi6g02785 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 73.112 2.11e-174 484.0
Armi7g00441 ACH 9 163 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 50.888 7.80e-45 144.0
Armi7g00531 . 136 243 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06960 32.143 6.03e-12 61.2
Armi7g01065 ACH 41 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 33.452 3.54e-28 110.0
Armi8g02050 ACH 1 392 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G49720 44.976 6.73e-90 275.0
Armi8g02156 ACH 5 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 44.848 9.22e-42 136.0
Armi8g02517 ACH 114 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 29.091 5.98e-15 72.0
Armi8g02547 ACH 1 310 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 50.307 7.49e-90 269.0
Armi9g00139 . 25 105 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G34590 44.444 5.90e-18 73.2
Armi9g01080 . 48 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 61.873 8.81e-115 339.0
Armi10g00708 . 1 404 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 61.905 3.65e-168 475.0
Armi10g00790 . 34 277 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 49.618 3.53e-67 210.0
Armi10g02165 ACH 7 382 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 49.292 1.38e-111 330.0
Armi11g00086 ACH 1 228 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35040 64.831 6.41e-106 306.0
Armi11g00238 ACH 1 553 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 56.726 0.0 538.0
Armi12g00622 ACH 6 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 50.113 3.17e-118 349.0
Armi12g00793 ACH 20 159 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G34590 50.714 2.50e-42 136.0
Armi12g01559 . 3 337 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G43700 46.667 2.39e-73 228.0
Armi13g00374 . 22 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 59.589 1.19e-49 157.0
Armi13g00433 . 21 188 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 54.706 2.13e-48 160.0
Armi13g00434 . 21 216 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 59.596 4.59e-67 209.0
Armi13g00661 ACH 49 151 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G49760 41.748 9.46e-16 68.6
Armi13g00671 . 138 243 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06960 32.727 3.06e-12 62.0
Armi13g00932 ACH 1 310 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 52.247 4.06e-107 315.0
Armi13g01299 . 62 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 41.564 1.05e-37 132.0
Armi13g01728 . 1 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G28770 38.78 7.98e-73 231.0
Armi14g00448 . 3 322 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G43700 47.853 1.05e-77 240.0
Armi14g00989 ACH 10 165 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 45.062 3.68e-39 129.0
Armi15g00088 ACH 1 382 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 51.422 3.16e-113 334.0
Armi15g01256 . 114 318 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 23.902 5.80e-18 79.0
Armi16g00082 . 121 322 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 26.699 8.53e-19 82.0
Armi16g00629 . 16 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 54.517 2.50e-96 285.0
Armi16g00788 . 23 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06839 58.108 2.97e-173 494.0
Armi16g01170 . 1 440 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G36270 49.345 5.52e-105 317.0
Armi17g00413 . 6 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 49.541 7.59e-87 261.0
Armi17g00492 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 65.766 4.73e-151 430.0
Armi17g00594 . 24 720 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40950 48.663 2.11e-165 491.0
Armi18g00252 . 54 169 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 67.5 5.48e-49 155.0
Armi18g00423 ACH 12 209 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G22850 36.181 2.31e-24 94.0
Armi18g00559 ACH 1 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 55.429 2.05e-114 333.0
Armi18g00633 . 16 111 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G18160 50.0 4.79e-27 97.4