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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00431 ATGGAAAATTTAACGATCGAAGAAGCAACGAAGGTCGGAGAGAAGTATCGGTCGTTCCTCCACGAAGAATCCGAGAACACCCATTGGAGACACGGCGGTCCCCCAATCTACGATGCCGTTAACCAACTCTTTGAAGAAGGCCGAACCAAGGTGTGGGAAAAGGGATCGATAGAAGAAATTGTTCAAAATGCAATAAAGTCATGGGAGATGGAGCTCAGCCACAAGATTCGTATTCAAGACTTTAAGACCATCAATCCTGATAAGTTTAAGCTCATCGTCAACGGGAGGGAGGGATTATCGGCAGAGGAAACACTAAAGGTTGGAAGTTACAATGCATTACTGAAGAGTACACTTCCAGAAGAGTACAAGTATTACAATGCAGAAGAAGAGACCTTCGAATCGTCTCACGACATTTTCCGATTGGCATTTCCTCGTGGATTCGCGTGGGAGGTCATAAGCGTTCATTCCGGACCACCGGTTATATCGTACAAGTTCCGGCATTGGGGTTACTTTGAAGGTCCGTTCAAAGGCCATGCTCCCACCGGTGAAATGGTTGAGTTCTACGGCATGGGGATCCTCAAGGTTGATGAATCGTTGAGAGCGGAAGATGTCGAGATCTATTACGATCCAGCAGATCTTATCTCGAACCTACTCAAAGGATCGTTAATCTCCGAACAACAACATCCTGCAACGGATACTTCTGCCGCAAACACCAGTAGCTGTCCATTTCAGAAGGGAGCTTGA 744 46.51 MENLTIEEATKVGEKYRSFLHEESENTHWRHGGPPIYDAVNQLFEEGRTKVWEKGSIEEIVQNAIKSWEMELSHKIRIQDFKTINPDKFKLIVNGREGLSAEETLKVGSYNALLKSTLPEEYKYYNAEEETFESSHDIFRLAFPRGFAWEVISVHSGPPVISYKFRHWGYFEGPFKGHAPTGEMVEFYGMGILKVDESLRAEDVEIYYDPADLISNLLKGSLISEQQHPATDTSAANTSSCPFQKGA 247
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00431 247 MobiDBLite consensus disorder prediction 228 247 - -
Armi1g00431 247 PANTHER PATHOGENESIS-RELATED FAMILY PROTEIN 9 244 IPR053218 -
Armi1g00431 247 Gene3D - 108 218 - -
Armi1g00431 247 SUPERFAMILY NTF2-like 132 214 IPR032710 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00431 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr12:47662710 Armi1g00431 Armi-Chr1:8212962 dispersed
Armi Armi-Chr12:47682825 Armi1g00431 Armi-Chr1:8212962 dispersed