Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Armi1g00439 | ATGGATTCGGTTAATCAATTGGCTCTTACCTCAAATAAGACCAGATTGGCTCGTACTTTTACCAAAGTTTTGCATATTCGAGCTGTGGCAGGAGCAGCAACGGTAGATAGAAGTCGAAAAACTAAGGTGAGTGAAAAGGTCAAGAAGGATGACGATGGAAGGAAGTTGGTTAGTGACGAAAATGACGAGTTTCGGAACAGAGCAGCGTTGGATGCGTTTATTGCCAAAGTTTTTGCGACCATTTCTTCCGTGAAAGCTGCATATGCCCAGTTGCAGTATGCCCAATCTCCTTATGACGCCGAAGGGATTCAGTCGGCTGATCAGATCATGGTCTCTGAACTCAAGAGCTTATCGGAGTTCAAGCAGTCGTTCTTGAAGAAACATCTTGACGACGACTCCCCTGAAACCACTCACCTGTTGGCTGAAATTCGTGAACAGAAGAATCTCTTAACAATGTACGAAATCACCGGGAAAAAGCTGGACAGTCAGAGCAAGCTCAAAGACTCCGAGATCATATTCTTGAAAGAGAAATTAGACGAAGCCAACAGAGAAAATAAGTCGATCGAGAAGAGATTAAACTCAAGCGGGCCTTTATCGCCTCACCAGAAGCTTCGTTTTCCATCGCTTGACGATTTTGTATCATCTCTTCGGCAAACGACGAAATCCGTTAGAAGTTTCGTGAAGCTCATGATCGGTGAAATGGAATCAGCCAATTGGGATTTGGATGCAGCTGCGAGTTCGATCCAACCAGATGTTGTTTACTCGGATCCCACCCATAAATGCTACGCATTCGAGTCATTCATTTGTCGAGTGATGTTCGATGGGTTCAATCACCCAAGTTTCTCCATCGTCAACGATTCCGAGTCTCCAACCAATGATAAACGGTTTTTCATCGACAATTTCATGGAACTAAAATCCTTGAAAGCAAAAGAGTACATTAAATGGAAACCAAAATCAATGTTCACCAAATTTTGTTGGTCCAAGTACCTGAAACTCGTTCATCCCGTAATGGAATCCTCTCTTTTCGGGAACTCGAATCAACGAAATCTCGTGGCGGCTGGAAAATTCCCTAAAACAACGTTCTTTTCGTCGTTCGCGGATGTCGCGAAACGGGTTTGGCTTCTACATTGTTTGGCATTCGCGGTGGATCGAAACGAGGCGGCCGCCGCCACGTTTCAGGTGAGGAAATGCAGCCGGTTCACGGAGGTGTTCATGGAAAGCGTAAACGAACCACCACCAAAAGCCTCGCCGGAGGTGGCGTTCACGGTGGTGCCGGGGTTCAAGGTGGGTAAAACCGTTATACAGTGTCAAGTGTATTTGAGTTGA | 1326 | 45.63 | MDSVNQLALTSNKTRLARTFTKVLHIRAVAGAATVDRSRKTKVSEKVKKDDDGRKLVSDENDEFRNRAALDAFIAKVFATISSVKAAYAQLQYAQSPYDAEGIQSADQIMVSELKSLSEFKQSFLKKHLDDDSPETTHLLAEIREQKNLLTMYEITGKKLDSQSKLKDSEIIFLKEKLDEANRENKSIEKRLNSSGPLSPHQKLRFPSLDDFVSSLRQTTKSVRSFVKLMIGEMESANWDLDAAASSIQPDVVYSDPTHKCYAFESFICRVMFDGFNHPSFSIVNDSESPTNDKRFFIDNFMELKSLKAKEYIKWKPKSMFTKFCWSKYLKLVHPVMESSLFGNSNQRNLVAAGKFPKTTFFSSFADVAKRVWLLHCLAFAVDRNEAAAATFQVRKCSRFTEVFMESVNEPPPKASPEVAFTVVPGFKVGKTVIQCQVYLS | 441 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Armi1g00439 | 441 | Coils | Coil | 171 | 191 | - | - | |
| Armi1g00439 | 441 | PANTHER | PROTEIN GRAVITROPIC IN THE LIGHT 1 | 15 | 441 | IPR040225 | GO:0009639(InterPro)|GO:0009959(InterPro) | |
| Armi1g00439 | 441 | Pfam | Plant protein of unknown function (DUF641) | 66 | 191 | IPR006943 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Armi1g00439 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 20233 | Armi1g00439 | Armi7g00275 | |
| 20234 | Armi1g00439 | Armi8g02514 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Armi | Armi-Chr15:13636948 | Armi1g00439 | Armi-Chr1:8563755 | dispersed | |
| Armi | Armi-Chr1:8563755 | Armi3g01500 | Armi-Chr3:40072141 | dispersed | |
| Armi | Armi-Chr1:8563755 | Armi15g01214 | Armi-Chr15:67224950 | wgd | |
| Armi | Armi-Chr1:8563755 | Armi7g00275 | Armi-Chr7:4849407 | wgd | |
| Armi | Armi-Chr1:8563755 | Armi8g02514 | Armi-Chr8:93622024 | wgd |