AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00445 ATGGCCGACATCGAAACCCTAGGTATTCTTGATGAGATTCAAGCACTCGTCTCCGATAAGCTTCAAGTGGTTTCTTACAAATGGCTGAGTCGGAACTTTTTGGTGCCATCAAATACTGCCAAGAAGCTGCTTCAAGAGTTTGTGGAAAAGAATGGAAGTCAACTGGAAGTTGTATATTCTCTGTCTGGATGGTTGAAGAATAATCCTTCAGCTTACCATATAAAGCTTAGTTTGGGCTCTAAACTTTCAGAAGCCAAAGAAGAATTTAGTGACGGTTGTTCAATTCAAGTCTACAGTGTCCAAGCTTGTATTCCTAAGGATCCAGCAGTGCTTTGGAATACTGAATATATACAAGCAGAAGAGCTCTTCAAGGAGCCCTCTAACGTTGTTAATTGCTTGCGGGATAACCGGTTTTGTGGGGTCTCGAATTCATATGTAAAACGCAACGGTGAGGGACCACCTGTAAGCAGTGCAGCTCCACTGTTGAAAAATGTAGGAATCTGTGGACCATCCAGAAGTAGTTCTTCTAAGCAAACTTCTGAAACTTCATTACGTCAAGAAAGAAGGGTTGAGCAATCGGACCCTAAGCCTGATCAGGGCAAAGATATTCAAAGCGGAAGTCATCAGGCACAAGCTCTAAAACAGGATGGCAAACCAGTTGCACATAAAGAGCAAGTTCCTCAATTGCCTCCTAACAAAAAGAGAAACCAGAATGATAAAAGCTCTTCTGGGACTGCAGGCTCATTAGCTAGTATGTGGGGTCGTGCATCGTCAAAACCAAAGCCGGATTGTGCATCAATAAAAACTGAGAATGCCGTTCCTATTTCTGATGATGCTCAAGTACGTGCTAATGAATTGTTGGAGGATGAAAGCAGTGACGATGATCAAATGAACATCAAGAGAGCGTCCAATGATGAAGGCAATAATAGAAAGAGGAGGGTTGTCTTTGATTACTCAGATGAAGATGATGACTGCAAGGATGCAGTGAATCTAGCCTCGCCAGATCCTCCAAAGAAGCAAGTTTCTCTTGATTCAAAGAAAAGTACTAAAACTTCAAGTCTGGAAAATAAGAATTTGGATTTTGATGAACCAAAGGAAGAGAAAGTGAAGGTTGAGAAAGAAAAGGTGCCCGAAATTCTTCCCAAATCTATGTTGAAAGAAGAAAGCCATGACAGGAAAAGGGGGAATGTCACTTCAAACGAGAATCAATGTCCTGATAAAGTGAGTGATACAAATCAGAAAGATAAAGCGAGTGATGTTGCTCAAAATGTGCCTAAAAAGAGAAAAGTTTTGAAGACACGAATCGATGAGCGTGGGAGAGAAGTAACTGAGGTTGTTTGGGAGGATGATGAGAAAGAGACAAAGCCTGGTGACAATACAAGAAAAGATAAAGGTGACAGTAATACTGCAAACAATGTTGTCAACAGGCCACCTGCAGCAGCTCCTAAGAAGTCGCCTGCATTAGGTAACGCTTCATCCCATGCAACAGGGAAAGCAGGAAACAAGAAAGCCGGTACGAAGGATCCTAAGCAGGGGAATATTATGTCATTTTTCAAGAAGGTTTGA 1566 41.83 MADIETLGILDEIQALVSDKLQVVSYKWLSRNFLVPSNTAKKLLQEFVEKNGSQLEVVYSLSGWLKNNPSAYHIKLSLGSKLSEAKEEFSDGCSIQVYSVQACIPKDPAVLWNTEYIQAEELFKEPSNVVNCLRDNRFCGVSNSYVKRNGEGPPVSSAAPLLKNVGICGPSRSSSSKQTSETSLRQERRVEQSDPKPDQGKDIQSGSHQAQALKQDGKPVAHKEQVPQLPPNKKRNQNDKSSSGTAGSLASMWGRASSKPKPDCASIKTENAVPISDDAQVRANELLEDESSDDDQMNIKRASNDEGNNRKRRVVFDYSDEDDDCKDAVNLASPDPPKKQVSLDSKKSTKTSSLENKNLDFDEPKEEKVKVEKEKVPEILPKSMLKEESHDRKRGNVTSNENQCPDKVSDTNQKDKASDVAQNVPKKRKVLKTRIDERGREVTEVVWEDDEKETKPGDNTRKDKGDSNTANNVVNRPPAAAPKKSPALGNASSHATGKAGNKKAGTKDPKQGNIMSFFKKV 521
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00445 521 PANTHER DNA POLYMERASE DELTA SUBUNIT 3 1 520 IPR019038 GO:0003887(PANTHER)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0006271(PANTHER)|GO:0006297(PANTHER)|GO:0043625(InterPro)|GO:0043625(PANTHER)|GO:1904161(PANTHER)
Armi1g00445 521 Pfam DNA polymerase subunit Cdc27 23 520 IPR019038 GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0043625(InterPro)
Armi1g00445 521 Gene3D DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 7 146 IPR041913 -
Armi1g00445 521 MobiDBLite consensus disorder prediction 282 329 - -
Armi1g00445 521 MobiDBLite consensus disorder prediction 340 397 - -
Armi1g00445 521 FunFam DNA polymerase delta subunit 7 149 - -
Armi1g00445 521 MobiDBLite consensus disorder prediction 182 198 - -
Armi1g00445 521 MobiDBLite consensus disorder prediction 230 252 - -
Armi1g00445 521 MobiDBLite consensus disorder prediction 408 465 - -
Armi1g00445 521 MobiDBLite consensus disorder prediction 166 521 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00445 K03504 DNA polymerase delta subunit 3