Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Armi1g00457 | ATGAGATTGAGGGAAAACATCAGTTTTCGTGTCTTATTGGCGATTATTAGCATTCTATCGCCATTAATGGAGTTCGGAGCAATCCAAATCGATGCATCAACGACTGGATGTGATTTGTTTCAAGGAAATTGGATTTCAGATCAATCGTATCCACTCTATAACGAATCAACCTGTCCTTTCCTTGAAAAGGAGTTCAACTGCGTCAACAATGGCCGTCCTGACCGTTTGTATCTCAAATACCGATGGGAACCTCACGGCTGCCGTTTATCCAGATTTGATGGTCGAAACTTCTTAGAAAAACTAAGAGGAAAAACAATAATGTTTGTAGGAGATTCGCTTAGCCGAAACCAGTGGTTGTCGATGCTATGCATGATACATTCTTCGGTGCCAACCGCAAATTACGCGGCCAATATCTCCGTGATTATGGATATGACCACTTACACCTTCACGGATTATGGGGTGAAAGTGATGTACCATCACAATTTATATCTAGTGGATATAGTGAAGAAGAGATTTGGGAGGGTCTTGAGTTTGGATACCTTGACAGCTGGCAAGCTGTGGTTGGGTGTTGATTACCTTGTCTTCAACACGTGGCACTGGTGGAACCGTAGAGGAGCTAGTCAACCATTTGATTATATACAAGAAGGAAGTCGTGTATATAAAGACATGGACAGAGTAGTGGCTTTCGGAAAGGCTGTTGCCACATGGGGTCGATGGGTCGATGCAAATGTTGTTCCGAACAAAACACAAGTGTTTTTTCAAGGGATATCACCATCACATTACAATGGCACCGACTGGGGAGAACCCAAGGCAAAATCCTGCTCCGGCCAGAAAATCCCTCTTCTCAGCTCCACCTATCCCGGAGTTTCACCGCCGGCACTGTCAGTCCTCAAGAACTCCCTCAAAACCATCAAGAAACCGGTGAAGTTGCTTGACATCACTTACCTTTCTCTGCTACGAAAAGACGGCCATCCGTCGGCTTACGGCTTAGGGCCGGTGGATTGCAGCCACTGGTGTCTCGCCGGAGTTCCAGATACGTGGAACGTTTTGCTTTACAATCTTATGTTTTAA | 1071 | 45.19 | MRLRENISFRVLLAIISILSPLMEFGAIQIDASTTGCDLFQGNWISDQSYPLYNESTCPFLEKEFNCVNNGRPDRLYLKYRWEPHGCRLSRFDGRNFLEKLRGKTIMFVGDSLSRNQWLSMLCMIHSSVPTANYAANISVIMDMTTYTFTDYGVKVMYHHNLYLVDIVKKRFGRVLSLDTLTAGKLWLGVDYLVFNTWHWWNRRGASQPFDYIQEGSRVYKDMDRVVAFGKAVATWGRWVDANVVPNKTQVFFQGISPSHYNGTDWGEPKAKSCSGQKIPLLSSTYPGVSPPALSVLKNSLKTIKKPVKLLDITYLSLLRKDGHPSAYGLGPVDCSHWCLAGVPDTWNVLLYNLMF | 356 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Armi1g00457 | 356 | PANTHER | PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED | 19 | 354 | IPR029962 | GO:0005794(PANTHER)|GO:0016413(PANTHER)|GO:0016413(InterPro) | |
| Armi1g00457 | 356 | Pfam | GDSL-SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | 89 | 353 | IPR026057 | GO:0016740(InterPro) | |
| Armi1g00457 | 356 | Pfam | PMR5 N terminal Domain | 36 | 87 | IPR025846 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Armi1g00457 | K23877 | xyloglucan O-acetyltransferase |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Armi | Armi-Chr1:9064875 | Armi3g01557 | Armi-Chr3:43077533 | dispersed | |
| Armi | Armi-Chr1:9064875 | Armi7g00278 | Armi-Chr7:4917845 | wgd | |
| Armi | Armi-Chr1:9064875 | Armi8g02461 | Armi-Chr8:92840394 | wgd |