AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00477 ATGGTAGGAGGAATAGGAATAGGAATTGCAGCAATACCCAGATCAGTTTCCATTTTGCCCCACAACAAATTTCAACTCCAAAATTCAAATTCAAACCCTAGAAATGGAACCCATTTTCTAGAAAGAACTAGAATTCCACCAACCAAGTTATCTTTCCAGAAGTTTTCCCCTATTATCCACATTCCTTCCTTCTCCACCAAAGCTGCTGCTTCTTCAGTAGGAAATACAGAATATGTGGAGGAGCCTGCTACAAATGTGAAATTTCAGTCATCTTTGAGTCTTCCTGATTGCCCGAGTTCGTTATCTTTGATTGGAACAGGATTCAGAGAAAAGGTTTTTGCGATAATAGGCGTTAAGGTCTATGCCGCGGCGCTATACTTGAACCCCTCTATCCTGGATAAGTTAGAAGCCTGGAAAAGACAAAATGCAGCTGAAATTCAAGAGGATTCATCTTTGTTCGACTTAATCTATCAGGATCCTTTAGAGAAATCGTTACAGATAGTTCTAGTCAGAGATGTTGATGGCAAAACTTTCTGGGATGCTCTAGACGAAGCCATCTCTCCAAGAATCAAATCGCCCACTTCGGTTGATCAAACGGCTCTCTCCATATTCCGTGGAATCTTCCAAGATCGGCCGTTAAAGAAAGGAACTTCCATATTCTTGACATGGCTTCACCCCTCCAAAATGCTGGTTCACTTATCGGCCGAAGGCATTCCATCGGCTGCAGATGCTACAATCCAATCAGAAAACGTGACAATCTCGCTCTTTGACGTGTTTTTTGGCCGTGGCCCCGTTTCTCCTTCCTTAAAAGCTTCCGTTAGCAACGGTTTGGCTTCGATTCTCAAATAA 849 42.64 MVGGIGIGIAAIPRSVSILPHNKFQLQNSNSNPRNGTHFLERTRIPPTKLSFQKFSPIIHIPSFSTKAAASSVGNTEYVEEPATNVKFQSSLSLPDCPSSLSLIGTGFREKVFAIIGVKVYAAALYLNPSILDKLEAWKRQNAAEIQEDSSLFDLIYQDPLEKSLQIVLVRDVDGKTFWDALDEAISPRIKSPTSVDQTALSIFRGIFQDRPLKKGTSIFLTWLHPSKMLVHLSAEGIPSAADATIQSENVTISLFDVFFGRGPVSPSLKASVSNGLASILK 282
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00477 282 PANTHER FATTY-ACID-BINDING PROTEIN 3, CHLOROPLASTIC 60 281 - GO:0005504(PANTHER)|GO:0006631(PANTHER)|GO:0009570(PANTHER)
Armi1g00477 282 Gene3D - 131 277 IPR016089 -
Armi1g00477 282 Gene3D - 88 259 IPR016088 -
Armi1g00477 282 SUPERFAMILY Chalcone isomerase 78 282 IPR036298 GO:0016872(InterPro)
Armi1g00477 282 Pfam Chalcone-flavanone isomerase 85 278 IPR016087 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00477 K01859 chalcone isomerase [EC:5.5.1.6]