AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Armi1g00487 | ATGGTGGCTCTGTCAAAACCTCCAATTGAACAGTTCTTTGTGAAACCCTCAAAACCAAACACTAATAACCCATTAATCATTCCATCAATTCCTCTCATTGACCTCTCGAAACCCGAATCAAAACACCAACTTGTTAAGGCGTGTCAAGATTTTGGATTCTTTAAGGTCGTTAATCATGGAGTTCCTAAAAAGTTCATCAATAAACTCGAGTCAGAAGCTGTCAAGTTCTTCTCTTGTCCTCTTTCTACCAAAGAAAAGGCCGGACCACCCGACCCGTTTGGGTATGGAAACAAGAGAATTGGTCGAAACGGGGATGTGGGTTGGGTCGAGTATCTTCTTCTCAACGCAAAACTCGAATCGGATTACCAGAGATATCTATCTGTGTTTGAAGAAAACCCGGAAATATTCCAGGGAGTTGTGAATGATTATGTGACAGCAGTAAAGAAGATGGCATGTGAAATCCTCGAGTTATTGGCGGATGAAATGAAACTGCAGCCAAGAAATGTGTTTAGTAAACTGTTGATGGATGAAGAAAGTGACTCTGTTTTCAGAGTAAATCACTACCCACCATGCCCAGAGTTTCAAGAAAATGAAAAAAATGGAAGGAAATTGGTGGGTTTTGGAGAACACACAGACCCACAAATCATATCTGTTTTAAGATCTAATAACACATCTGGGCTTGAAATCTCATTGAGAGATGGAAGTTGGATGTCTGTTCCTGCTGATTCTGAGTCTTTTTTCATCAATGTTGGTGACTCTTTACAGGTGATGACGAATGGAAGATTCAAGAGTGTGAAGCATAGGGTGGTGGCAAACAGTAGAAAGAGTCGGGTTTCGATGATCTATTTTGGAGGACCACCATTGAGCGAGAAGATAGCCCCATTGACATCACTTATGCAAGGGGAGGAAGACAGTTTGTACAAGGAGTTTACTTGGTTCGAGTACAAGAAATCCGCGTTTAATTCAAGATTATCAGATAACAGATTAGGGTTGTTCGAGAAAATCGCTGCATCTTAG | 1017 | 41.0 | MVALSKPPIEQFFVKPSKPNTNNPLIIPSIPLIDLSKPESKHQLVKACQDFGFFKVVNHGVPKKFINKLESEAVKFFSCPLSTKEKAGPPDPFGYGNKRIGRNGDVGWVEYLLLNAKLESDYQRYLSVFEENPEIFQGVVNDYVTAVKKMACEILELLADEMKLQPRNVFSKLLMDEESDSVFRVNHYPPCPEFQENEKNGRKLVGFGEHTDPQIISVLRSNNTSGLEISLRDGSWMSVPADSESFFINVGDSLQVMTNGRFKSVKHRVVANSRKSRVSMIYFGGPPLSEKIAPLTSLMQGEEDSLYKEFTWFEYKKSAFNSRLSDNRLGLFEKIAAS | 338 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Armi1g00487 | 338 | PRINTS | Isopenicillin N synthase signature | 44 | 61 | - | - | |
| Armi1g00487 | 338 | PRINTS | Isopenicillin N synthase signature | 246 | 272 | - | - | |
| Armi1g00487 | 338 | PRINTS | Isopenicillin N synthase signature | 210 | 231 | - | - | |
| Armi1g00487 | 338 | FunFam | Gibberellin 2-beta-dioxygenase 1 | 8 | 325 | - | - | |
| Armi1g00487 | 338 | Gene3D | - | 3 | 326 | IPR027443 | - | |
| Armi1g00487 | 338 | Pfam | 2OG-Fe(II) oxygenase superfamily | 180 | 284 | IPR044861 | - | |
| Armi1g00487 | 338 | Pfam | non-haem dioxygenase in morphine synthesis N-terminal | 30 | 123 | IPR026992 | - | |
| Armi1g00487 | 338 | SUPERFAMILY | Clavaminate synthase-like | 9 | 326 | - | - | |
| Armi1g00487 | 338 | ProSiteProfiles | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 178 | 286 | IPR005123 | - | |
| Armi1g00487 | 338 | PANTHER | 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED | 27 | 317 | IPR050231 | GO:0009416(PANTHER)|GO:0016706(PANTHER)|GO:0045487(PANTHER)|GO:0052634(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Armi1g00487 | K04125 | gibberellin 2beta-dioxygenase [EC:1.14.11.13] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Armi | Armi-Chr15:61428488 | Armi1g00487 | Armi-Chr1:9805227 | dispersed | |
| Armi | Armi-Chr1:9805227 | Armi9g00028 | Armi-Chr9:517204 | dispersed | |
| Armi | Armi-Chr1:9805227 | Armi15g01164 | Armi-Chr15:65696211 | wgd | |
| Armi | Armi-Chr1:9805227 | Armi7g00294 | Armi-Chr7:5222534 | wgd | |
| Armi | Armi-Chr1:9805227 | Armi8g02443 | Armi-Chr8:92470330 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Armi1g00487 | . | 46 | 346 | GA20OX gene family | AT5G51810 | 31.21 | 1.40e-42 | 149.0 | |
| Armi1g01123 | . | 132 | 319 | GA20OX gene family | AT1G60980 | 30.729 | 1.17e-24 | 97.4 | |
| Armi1g01127 | . | 62 | 330 | GA20OX gene family | AT4G25420 | 31.769 | 1.28e-37 | 137.0 | |
| Armi1g01131 | . | 34 | 357 | GA20OX gene family | AT1G60980 | 30.0 | 1.18e-39 | 143.0 | |
| Armi1g02925 | . | 62 | 363 | GA20OX gene family | AT5G51810 | 28.834 | 5.08e-24 | 99.4 | |
| Armi1g02926 | . | 62 | 363 | GA20OX gene family | AT5G51810 | 29.412 | 3.73e-24 | 99.8 | |
| Armi1g03301 | . | 112 | 366 | GA20OX gene family | AT1G60980 | 31.154 | 7.79e-38 | 134.0 | |
| Armi1g03303 | . | 56 | 357 | GA20OX gene family | AT1G60980 | 31.27 | 1.68e-43 | 152.0 | |
| Armi1g04734 | . | 42 | 286 | GA20OX gene family | AT5G51810 | 32.129 | 1.51e-28 | 110.0 | |
| Armi1g04737 | . | 42 | 350 | GA20OX gene family | AT5G51810 | 32.154 | 3.24e-43 | 151.0 | |
| Armi1g04743 | . | 61 | 368 | GA20OX gene family | AT4G25420 | 31.646 | 3.89e-43 | 151.0 | |
| Armi1g04747 | . | 40 | 367 | GA20OX gene family | AT4G25420 | 31.003 | 2.50e-45 | 157.0 | |
| Armi1g04749 | . | 40 | 343 | GA20OX gene family | AT4G25420 | 29.642 | 2.33e-42 | 149.0 | |
| Armi2g00284 | ACH | 61 | 354 | GA20OX gene family | AT4G25420 | 26.0 | 1.22e-24 | 100.0 | |
| Armi2g00285 | ACH | 56 | 335 | GA20OX gene family | AT5G07200 | 26.855 | 2.02e-21 | 91.7 | |
| Armi2g00286 | ACH | 61 | 368 | GA20OX gene family | AT4G25420 | 26.032 | 3.92e-18 | 82.0 | |
| Armi2g00938 | . | 234 | 355 | GA20OX gene family | AT1G44090 | 37.705 | 5.94e-19 | 80.1 | |
| Armi2g00939 | . | 63 | 355 | GA20OX gene family | AT1G44090 | 28.383 | 2.37e-30 | 116.0 | |
| Armi2g01171 | . | 16 | 183 | GA20OX gene family | AT5G07200 | 34.911 | 2.33e-29 | 109.0 | |
| Armi2g01172 | . | 16 | 379 | GA20OX gene family | AT5G07200 | 45.822 | 1.73e-120 | 352.0 | |
| Armi2g02957 | . | 40 | 356 | GA20OX gene family | AT4G25420 | 33.23 | 7.75e-55 | 182.0 | |
| Armi2g03105 | . | 35 | 372 | GA20OX gene family | AT1G60980 | 27.907 | 1.32e-34 | 129.0 | |
| Armi2g03106 | ACH | 38 | 127 | GA20OX gene family | AT4G25420 | 30.0 | 7.94e-10 | 54.7 | |
| Armi2g03107 | . | 189 | 372 | GA20OX gene family | AT1G60980 | 32.804 | 2.19e-27 | 104.0 | |
| Armi2g03213 | . | 55 | 358 | GA20OX gene family | AT1G60980 | 33.333 | 2.17e-35 | 130.0 | |
| Armi2g03355 | . | 24 | 375 | GA20OX gene family | AT4G25420 | 69.774 | 0.0 | 515.0 | |
| Armi2g03921 | . | 42 | 365 | GA20OX gene family | AT5G51810 | 32.317 | 1.94e-57 | 189.0 | |
| Armi3g00675 | . | 61 | 369 | GA20OX gene family | AT4G25420 | 24.762 | 8.48e-20 | 87.4 | |
| Armi3g01112 | . | 17 | 371 | GA20OX gene family | AT5G51810 | 62.81 | 2.21e-168 | 473.0 | |
| Armi3g01206 | . | 61 | 172 | GA20OX gene family | AT4G25420 | 29.204 | 1.78e-10 | 55.1 | |
| Armi3g01207 | . | 189 | 372 | GA20OX gene family | AT5G07200 | 35.326 | 1.00e-30 | 113.0 | |
| Armi3g01208 | . | 39 | 152 | GA20OX gene family | AT4G25420 | 29.661 | 1.49e-12 | 62.4 | |
| Armi3g02711 | . | 16 | 375 | GA20OX gene family | AT4G25420 | 67.68 | 0.0 | 507.0 | |
| Armi3g02963 | . | 40 | 368 | GA20OX gene family | AT4G25420 | 32.845 | 4.43e-55 | 183.0 | |
| Armi3g03820 | . | 30 | 332 | GA20OX gene family | AT5G07200 | 34.098 | 1.69e-46 | 160.0 | |
| Armi4g02431 | . | 53 | 374 | GA20OX gene family | AT5G07200 | 28.793 | 1.05e-28 | 112.0 | |
| Armi4g04208 | . | 40 | 368 | GA20OX gene family | AT4G25420 | 33.626 | 1.07e-56 | 187.0 | |
| Armi4g04540 | . | 86 | 361 | GA20OX gene family | AT4G25420 | 32.74 | 1.58e-36 | 133.0 | |
| Armi5g00010 | . | 61 | 342 | GA20OX gene family | AT5G51810 | 29.252 | 5.91e-27 | 107.0 | |
| Armi6g01962 | . | 37 | 368 | GA20OX gene family | AT4G25420 | 31.176 | 5.37e-51 | 172.0 | |
| Armi6g02673 | . | 206 | 367 | GA20OX gene family | AT5G51810 | 37.143 | 9.09e-29 | 107.0 | |
| Armi7g00152 | ACH | 63 | 369 | GA20OX gene family | AT4G25420 | 23.323 | 2.68e-16 | 77.0 | |
| Armi7g00153 | ACH | 63 | 355 | GA20OX gene family | AT4G25420 | 24.917 | 2.69e-16 | 77.0 | |
| Armi7g00154 | . | 61 | 362 | GA20OX gene family | AT4G25420 | 27.742 | 2.60e-24 | 99.8 | |
| Armi7g00155 | ACH | 57 | 335 | GA20OX gene family | AT5G07200 | 30.142 | 1.11e-26 | 106.0 | |
| Armi7g00156 | . | 62 | 369 | GA20OX gene family | AT4G25420 | 26.349 | 1.47e-20 | 89.4 | |
| Armi7g00157 | . | 57 | 335 | GA20OX gene family | AT5G07200 | 28.369 | 2.50e-26 | 105.0 | |
| Armi7g00158 | . | 57 | 335 | GA20OX gene family | AT5G07200 | 29.329 | 5.90e-27 | 107.0 | |
| Armi7g00159 | . | 81 | 335 | GA20OX gene family | AT5G07200 | 29.688 | 4.40e-24 | 99.0 | |
| Armi7g00160 | . | 143 | 358 | GA20OX gene family | AT5G07200 | 27.854 | 6.25e-20 | 87.8 | |
| Armi7g00161 | . | 36 | 364 | GA20OX gene family | AT1G60980 | 32.951 | 9.03e-49 | 167.0 | |
| Armi7g00294 | . | 63 | 357 | GA20OX gene family | AT5G51810 | 30.519 | 4.74e-40 | 143.0 | |
| Armi7g00330 | . | 80 | 351 | GA20OX gene family | AT1G60980 | 28.014 | 9.17e-39 | 139.0 | |
| Armi7g00512 | . | 44 | 352 | GA20OX gene family | AT4G25420 | 34.056 | 1.38e-54 | 182.0 | |
| Armi7g01534 | . | 47 | 368 | GA20OX gene family | AT5G07200 | 28.963 | 4.65e-27 | 107.0 | |
| Armi7g01967 | . | 54 | 366 | GA20OX gene family | AT5G51810 | 30.38 | 4.98e-41 | 146.0 | |
| Armi8g02443 | . | 63 | 346 | GA20OX gene family | AT5G51810 | 31.313 | 1.08e-42 | 150.0 | |
| Armi8g02449 | . | 61 | 343 | GA20OX gene family | AT4G25420 | 31.119 | 3.52e-25 | 101.0 | |
| Armi8g02608 | . | 35 | 330 | GA20OX gene family | AT5G07200 | 33.333 | 4.63e-48 | 165.0 | |
| Armi9g00028 | . | 60 | 367 | GA20OX gene family | AT5G51810 | 33.968 | 7.30e-40 | 142.0 | |
| Armi9g00164 | . | 21 | 359 | GA20OX gene family | AT4G25420 | 31.054 | 2.71e-41 | 146.0 | |
| Armi9g01444 | . | 59 | 347 | GA20OX gene family | AT4G25420 | 28.966 | 1.96e-39 | 142.0 | |
| Armi9g02030 | . | 37 | 334 | GA20OX gene family | AT5G07200 | 35.41 | 1.32e-49 | 169.0 | |
| Armi10g01753 | . | 39 | 154 | GA20OX gene family | AT4G25420 | 29.661 | 2.01e-09 | 53.5 | |
| Armi10g01754 | . | 42 | 353 | GA20OX gene family | AT5G51810 | 31.776 | 8.73e-45 | 156.0 | |
| Armi11g00761 | . | 35 | 357 | GA20OX gene family | AT4G25420 | 31.077 | 1.06e-45 | 157.0 | |
| Armi11g01253 | . | 32 | 141 | GA20OX gene family | AT4G25420 | 30.0 | 4.60e-09 | 51.6 | |
| Armi11g01254 | . | 183 | 296 | GA20OX gene family | AT1G60980 | 34.783 | 5.83e-23 | 90.1 | |
| Armi12g00151 | . | 36 | 357 | GA20OX gene family | AT5G51810 | 30.183 | 2.35e-48 | 166.0 | |
| Armi12g01521 | . | 36 | 117 | GA20OX gene family | AT5G51810 | 29.885 | 2.20e-07 | 47.0 | |
| Armi13g01322 | . | 54 | 361 | GA20OX gene family | AT4G25420 | 25.321 | 1.07e-22 | 95.1 | |
| Armi13g01323 | . | 54 | 357 | GA20OX gene family | AT4G25420 | 24.43 | 3.84e-24 | 99.4 | |
| Armi13g01646 | . | 32 | 343 | GA20OX gene family | AT4G25420 | 31.902 | 3.85e-51 | 172.0 | |
| Armi15g00165 | . | 61 | 356 | GA20OX gene family | AT5G51810 | 32.459 | 1.53e-39 | 142.0 | |
| Armi15g00264 | . | 25 | 371 | GA20OX gene family | AT5G51810 | 61.864 | 1.94e-163 | 461.0 | |
| Armi15g00594 | . | 60 | 357 | GA20OX gene family | AT4G25420 | 25.333 | 7.69e-24 | 98.6 | |
| Armi15g01080 | . | 63 | 360 | GA20OX gene family | AT5G51810 | 29.126 | 3.79e-32 | 121.0 | |
| Armi15g01167 | . | 37 | 335 | GA20OX gene family | AT5G07200 | 32.468 | 3.47e-45 | 157.0 | |
| Armi15g01172 | . | 33 | 356 | GA20OX gene family | AT1G60980 | 31.385 | 9.99e-49 | 166.0 | |
| Armi15g01533 | . | 24 | 358 | GA20OX gene family | AT5G07200 | 30.725 | 3.19e-39 | 141.0 | |
| Armi15g01612 | . | 75 | 372 | GA20OX gene family | AT5G07200 | 28.803 | 4.31e-39 | 140.0 | |
| Armi16g00074 | . | 40 | 368 | GA20OX gene family | AT4G25420 | 34.884 | 8.43e-60 | 195.0 | |
| Armi16g01246 | . | 72 | 368 | GA20OX gene family | AT4G25420 | 30.699 | 1.62e-29 | 115.0 | |
| Armi16g01574 | . | 35 | 352 | GA20OX gene family | AT4G25420 | 31.548 | 1.64e-45 | 157.0 | |
| Armi16g01575 | . | 225 | 367 | GA20OX gene family | AT5G51810 | 39.333 | 1.74e-26 | 100.0 | |
| Armi16g01576 | . | 32 | 154 | GA20OX gene family | AT4G25420 | 32.812 | 1.39e-11 | 59.7 | |
| Armi16g01578 | . | 43 | 364 | GA20OX gene family | AT5G51810 | 33.841 | 4.24e-51 | 172.0 | |
| Armi16g01818 | . | 61 | 349 | GA20OX gene family | AT5G51810 | 30.897 | 2.74e-35 | 130.0 | |
| Armi18g00364 | . | 67 | 328 | GA20OX gene family | AT5G51810 | 29.71 | 2.22e-27 | 108.0 | |
| Armi18g00719 | . | 32 | 360 | GA20OX gene family | AT1G60980 | 33.138 | 4.12e-47 | 162.0 | |
| Armi18g01361 | . | 38 | 335 | GA20OX gene family | AT4G25420 | 33.0 | 8.68e-50 | 169.0 |