Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Armi1g00498 | ATGGCTTCTTTTGCCACTTCTTCTACCTTCACCGCCATCCCGGCCACCACGACGGCCACCACTACCAAAAGACTGCCAAACTCGCCTTTCTTTTCCACCTCCCACCAACGTTCCAAAAAAATCCATCGCAGCTTCAAAGTCTCATGCAACTTCGCCGATGACAACGAGAAGCGAATCGAATCCGAAAATCTCACACTCCTCGAACACCACAATCTTGACCGGAGGAACTTGCTCTTAGGGCTCGGCGCCGGTGGCCTTTACACCACGGTCAACTTACCGGCGGCCTTAGCCGCCCCTATCACGACGCCTGACATCTCGACATGCAAAGCCTCAATCGATGGTTTCATTAACCTAAAAGATCGCATAAGAACCAATGCATGTTGTCCTCCGGTGCCACCACCTTCAGTAAAATCCGTGAAAAAACATGTCCTACCTAAATCCGAACCGGTCCGGTTAAGACCAGCGGCACATAGAGTCACTCCTGAGTACATTGAAAAGTACCAAAGAGCAATGGCAGCCATGAAAGCTCTCCCAGATGAAGACCCACACAGCTTCGTGCAACAAGCTAAAATCCATTGCGCTTACTGCAATGGTGGTTACTTTCAAGAAGGTTACCCTAATAAAGATCTTCAAGTTCACAACTGCTGGCTCTTCTTTCCTTTCCACCGTTGGTACTTGTATTTCTTCGAGAGAATACTCGGAAAATTGATCGATGATCCTACTTTTGGGTTGCCGTACTGGAACTGGGACAACCCTAGTGGGATGAGTATGCCGGCGTTCTTTGAAGGAAAATATTTCGATCCAAAAACAAGCGAACTAAACTCAGCCTTCGACGCATTTCGAAACGTCGAACATCTTCCACCAGCCATCCTCAACATCGATTTCAACAACATTGATAGTGCTGATTTTACTTGTGTACAACAAATAGGTTCAAACCTGAGTTTAATGTATAAGCAGATGATCGCCAACTCCCCGAACGCAGCAACTTTCTTCGGTGGTGAGTTCAAAGCTGGGGATAATCCTATTTCTATACAGAATTCTAAAGGGCCAATAGAGTCCGGTGTTCATACTGCGGCACACATTTGGGTTGGTAACCCTAGAATGCCGAACAACGAGGACATGGGGAACTTTTACTCGTCGGGATGGGACCCTTTGTTCTACACTCATCATGCAAACGTCGATCGTATGTGGAAAATATGGAAGGACTTGAAGGGACCCGAGTACCCTGATCACAATGAACCCACAGACCCTGATTGGCTCGACGCGTCATACGTGTTCTATGACGAGAACAAAGAGCTTGTACGTGTCTACAACAAAGACTCTGTTCAGATGGAGAATCTACATTACGAATATGAACCTTCCCCACTCCCTTGGCTTAAGAGTCGACCCGTTGGACGTAACAAGAACTCACATGTTGTAGCCAAGTCATTTGGGAATGTGGAGAAAGTGGAGGACATCAAGTTCCCGGTGAAACTTGACAAGATAGTTAAGGTGTTGGTGAAACGGCCAACCATAAATAGAAGCAAAGAGGATAAGAAGAAAGCATATGAGCTATTGTATGTTAATGATATCAAGCTCGATGGTGAGAAGTTTGTCAAGTTTGATGTGTTTGTAAATGACATAGACGATGGTACTCCATGCAGTCCACTTGATAGTGAGTTTGCGGGTAGTTTCTCGCAGTTGGCACATTTTCATGGGCACAAAATGTTGATGTCGAGTGGGGTGACGTTTGGGTTGAATGAGTTGTTGGACGACATACAAGCGGAGAGTGATGAGTATATTTTGGTGACGTTGGTGCCAAGGAATGGGTGCGAAGATGTAACCGTTGGTGTGATCAAGGTTGAGTTGGTTCCGTCAACTGCTTCAGGATGA | 1872 | 46.26 | MASFATSSTFTAIPATTTATTTKRLPNSPFFSTSHQRSKKIHRSFKVSCNFADDNEKRIESENLTLLEHHNLDRRNLLLGLGAGGLYTTVNLPAALAAPITTPDISTCKASIDGFINLKDRIRTNACCPPVPPPSVKSVKKHVLPKSEPVRLRPAAHRVTPEYIEKYQRAMAAMKALPDEDPHSFVQQAKIHCAYCNGGYFQEGYPNKDLQVHNCWLFFPFHRWYLYFFERILGKLIDDPTFGLPYWNWDNPSGMSMPAFFEGKYFDPKTSELNSAFDAFRNVEHLPPAILNIDFNNIDSADFTCVQQIGSNLSLMYKQMIANSPNAATFFGGEFKAGDNPISIQNSKGPIESGVHTAAHIWVGNPRMPNNEDMGNFYSSGWDPLFYTHHANVDRMWKIWKDLKGPEYPDHNEPTDPDWLDASYVFYDENKELVRVYNKDSVQMENLHYEYEPSPLPWLKSRPVGRNKNSHVVAKSFGNVEKVEDIKFPVKLDKIVKVLVKRPTINRSKEDKKKAYELLYVNDIKLDGEKFVKFDVFVNDIDDGTPCSPLDSEFAGSFSQLAHFHGHKMLMSSGVTFGLNELLDDIQAESDEYILVTLVPRNGCEDVTVGVIKVELVPSTASG | 623 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Armi1g00498 | 623 | Pfam | Common central domain of tyrosinase | 183 | 402 | IPR002227 | GO:0016491(InterPro) | |
| Armi1g00498 | 623 | PIRSF | PPO-plant | 1 | 618 | IPR016213 | GO:0004097(InterPro)|GO:0046148(InterPro) | |
| Armi1g00498 | 623 | PRINTS | Tyrosinase copper-binding domain signature | 213 | 230 | IPR002227 | GO:0016491(InterPro) | |
| Armi1g00498 | 623 | PRINTS | Tyrosinase copper-binding domain signature | 382 | 400 | IPR002227 | GO:0016491(InterPro) | |
| Armi1g00498 | 623 | PRINTS | Tyrosinase copper-binding domain signature | 244 | 249 | IPR002227 | GO:0016491(InterPro) | |
| Armi1g00498 | 623 | PRINTS | Tyrosinase copper-binding domain signature | 355 | 366 | IPR002227 | GO:0016491(InterPro) | |
| Armi1g00498 | 623 | Gene3D | - | 98 | 463 | IPR008922 | - | |
| Armi1g00498 | 623 | PANTHER | TYROSINASE FAMILY MEMBER | 73 | 567 | IPR050316 | - | |
| Armi1g00498 | 623 | SUPERFAMILY | Di-copper centre-containing domain | 126 | 458 | IPR008922 | - | |
| Armi1g00498 | 623 | ProSitePatterns | Tyrosinase CuA-binding region signature. | 213 | 230 | IPR002227 | GO:0016491(InterPro) | |
| Armi1g00498 | 623 | Pfam | Protein of unknown function (DUF-B2219) | 488 | 616 | IPR022740 | GO:0004097(InterPro) | |
| Armi1g00498 | 623 | Pfam | Polyphenol oxidase middle domain | 414 | 463 | IPR022739 | GO:0004097(InterPro) | |
| Armi1g00498 | 623 | ProSitePatterns | Tyrosinase and hemocyanins CuB-binding region signature. | 383 | 394 | IPR002227 | GO:0016491(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Armi1g00498 | K00422 | polyphenol oxidase [EC:1.10.3.1] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 20249 | Armi1g00498 | Armi8g02426 | |
| 20250 | Armi1g00498 | Armi8g02428 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Armi | Armi-Chr1:10035844 | Armi1g00498 | Armi-Chr1:10136062 | dispersed | |
| Armi | Armi-Chr1:10136062 | Armi1g00504 | Armi-Chr1:10344168 | dispersed | |
| Armi | Armi-Chr1:10046333 | Armi1g00498 | Armi-Chr1:10136062 | proximal |