Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Armi1g00504	ATGTCTTCTTCAATACTTCCCCTCACCTCTGCATGCACACAAACACCATCTCCTACATCCACCAACATCACATTCCTAAATTCTTCCACTTTCATCTCAAACTCCAAACCCTTCTCCCAACAATCCTCCAAAAACAAGCACAAAAACCACCATGCTAATAACTTCAAACTCTCATGCAACATCACACCACCAAATAATGACACCAACAATAACCAAAAACCACTCATAATCCCAGAACCCCAAACCCTCATTCTCCCCAATCTCGACCGGAGAAATCTCCTCATCGGCGCCGGCCTCTACACCACCGTCAACTTCACTAACTCCATACCATCGGCTTTAGCCGAACCAATCACATCTCCAAACATCTCATCCAGTTGCAAGACCGCTGCCATGGGAATCGGAAACATGAAAGACGCCGTGAGAACTCGAGCCTGTTGTCCGCCGGGAAAAGATAAACCCATCAAAACCTTCGTGTTTCCAAAAGAGAAAACGGTGAAAATGAGGTGGCCGGCGCATCGAGGCACGCCGGAGAACATTGAGAAATATAAAAAAGCAATCCAAGCAATGAGAGATCTCCCAGATGACCACCCACATAGCTTCATCCAACAAGCTAAAATCCATTGCGCGTATTGCAACGGAGGCTACACACAAGTCGAAAATGGGTTCCCAGATATCGATATCCAGATTCACAACTCATGGCTCTTCTTTCCGTTCCATCGTTGGTACTTGTATTTCTACGAAAGAATACTCGGAAAGTTGATAAACGATCCCACTTTCGCTTTACCTTACTGGAATTGGGATAACCCAACCGGAATGACGATTCCATCCATCTTTGAAGAAGGTGGGAAAGGCACCAAAGATAATCCAAATTCTCTCTTTGACGCCTACAGAGACGGGAATCATCTCCCACCGACAATAGTTGATTTAAACTTCAGTGGAGAAAGTGATGCTTCTTGTTTAGAACAAATCGGAATCAATCTTTCAACAATGTACAGACAAATGGTCTCAAGTGCAACAAGTGACACACTTTTCTTCGGTGGCAAATACGTCGCCGGTGATCCACCCGTTGCAAATGGTGCCAAATCAATTGGTTCCATTGAAGCCGGTTGTCACACCGCCGTACACCGTTGGGTGGGTGACTCGAGAATGCCGAACAATGAAGACATGGGAAACTTCTATTCCGCTGGTTATGATCCTTTGTTTTACGTCCACCATACAAACGTCGATCGCATGTGGAAGATATGGAAGGATTTGGGGATTCCAGGACACTCAGAACCAACTTCAAGTGATTGGTTAAACGCATCGTATGTGTTCTACGATGAAAACGAAGAGCTTGTACGTGTCTACAACAAAGATTCCGTCAAGATTGAGGATTTAAAGTACGGTTACGAAAGATCCGAGATTCCATGGTTGAAGGGTCGACCAGTCCCACGTAGCAAAAACTCGAAAATCGCATTAAAATCCATCGGAAAAGTGAAGAAAGTGCAGGATGTGAAGTTTCCGGTGAAGTTAGACAAGGTTGTGGAGGTTCTTGTGAAGAGGCCGGTTGTTAATCGGAGTTCTGGGGATAAAGAAAAGGCGACTGAGGTGTTGTTGATTAATGGAATCTTGTTTGATGGTGAAGCATTTGTGAAGTTTGATGTGTTTGTGAATGACAAGGAAGATGGTCGGCCGAGTTTGCCGTCTGATAGTGAGTTTGCCGGAAGTTTTTCGCAGGTTCCGCATAGTGATATGAACAAGATGTTGATGTCGAGTGCTGCGAAGTTTGGGATTTCGGAGTTGTTGGAGGATACGGAGGCTGAAGGTGATGAGTTTGTGTTGGTGAAATTGGTACCGAGGGCTGGGTGCGATGATTTGAGCATTTCGGAGATTAAGATTGAGTTGGTTCCGATTGTTTGA	1899	45.02	MSSSILPLTSACTQTPSPTSTNITFLNSSTFISNSKPFSQQSSKNKHKNHHANNFKLSCNITPPNNDTNNNQKPLIIPEPQTLILPNLDRRNLLIGAGLYTTVNFTNSIPSALAEPITSPNISSSCKTAAMGIGNMKDAVRTRACCPPGKDKPIKTFVFPKEKTVKMRWPAHRGTPENIEKYKKAIQAMRDLPDDHPHSFIQQAKIHCAYCNGGYTQVENGFPDIDIQIHNSWLFFPFHRWYLYFYERILGKLINDPTFALPYWNWDNPTGMTIPSIFEEGGKGTKDNPNSLFDAYRDGNHLPPTIVDLNFSGESDASCLEQIGINLSTMYRQMVSSATSDTLFFGGKYVAGDPPVANGAKSIGSIEAGCHTAVHRWVGDSRMPNNEDMGNFYSAGYDPLFYVHHTNVDRMWKIWKDLGIPGHSEPTSSDWLNASYVFYDENEELVRVYNKDSVKIEDLKYGYERSEIPWLKGRPVPRSKNSKIALKSIGKVKKVQDVKFPVKLDKVVEVLVKRPVVNRSSGDKEKATEVLLINGILFDGEAFVKFDVFVNDKEDGRPSLPSDSEFAGSFSQVPHSDMNKMLMSSAAKFGISELLEDTEAEGDEFVLVKLVPRAGCDDLSISEIKIELVPIV	632

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Armi1g00504	632	Gene3D	-	115	467	IPR008922	-
	Armi1g00504	632	Pfam	Polyphenol oxidase middle domain	427	475	IPR022739	GO:0004097(InterPro)
	Armi1g00504	632	PRINTS	Tyrosinase copper-binding domain signature	261	266	IPR002227	GO:0016491(InterPro)
	Armi1g00504	632	PRINTS	Tyrosinase copper-binding domain signature	397	415	IPR002227	GO:0016491(InterPro)
	Armi1g00504	632	PRINTS	Tyrosinase copper-binding domain signature	370	381	IPR002227	GO:0016491(InterPro)
	Armi1g00504	632	PRINTS	Tyrosinase copper-binding domain signature	230	247	IPR002227	GO:0016491(InterPro)
	Armi1g00504	632	SUPERFAMILY	Di-copper centre-containing domain	140	470	IPR008922	-
	Armi1g00504	632	PANTHER	TYROSINASE FAMILY MEMBER	89	595	IPR050316	-
	Armi1g00504	632	Pfam	Common central domain of tyrosinase	198	417	IPR002227	GO:0016491(InterPro)
	Armi1g00504	632	ProSitePatterns	Tyrosinase and hemocyanins CuB-binding region signature.	398	409	IPR002227	GO:0016491(InterPro)
	Armi1g00504	632	PIRSF	PPO-plant	8	630	IPR016213	GO:0004097(InterPro)\|GO:0046148(InterPro)
	Armi1g00504	632	ProSitePatterns	Tyrosinase CuA-binding region signature.	230	247	IPR002227	GO:0016491(InterPro)
	Armi1g00504	632	Pfam	Protein of unknown function (DUF-B2219)	500	628	IPR022740	GO:0004097(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Armi1g00504	K00422	polyphenol oxidase [EC:1.10.3.1]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	20252	Armi1g00504	Armi7g00425
	20253	Armi1g00504	Armi8g02419
	20254	Armi1g00504	Armi8g02421

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Armi	Armi-Chr1:10046333	Armi1g00504	Armi-Chr1:10344168	dispersed
	Armi	Armi-Chr1:10136062	Armi1g00504	Armi-Chr1:10344168	dispersed
	Armi	Armi-Chr1:10344168	Armi8g02422	Armi-Chr8:91798469	dispersed
	Armi	Armi-Chr1:10213115	Armi1g00504	Armi-Chr1:10344168	proximal