Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Armi1g00515	ATGGCCACTTCTTCTACTTCCACTTCCACTTGGAATAACCCAAAACCCAATTTCTTATTTTCTTCAAAAGAACTCTTTCCTAATTCCAATTCCACTTCAATCACCTTCTCAAAAAAAACCATTCGTTCTGCACTTCAAACGCCGAAGATTCTTCAATTACCGAAACAATCCGTCGGAAAACGTTCCACCATTCCCGTTGAACCGTCGTCTTCACCGGCGGTCCAACAAAATTGGAACCTGTTACAGAAACTTGCGGCAATGGCATTGGATGCTGTGGAAGATGGATTAATTGCACGTGAAAAACGACATCGTTTACCGAAAACGGCGGACCCAAATGTTCAAATCGCCGGGAATTTTTCTCCCGTACCGGAGCAACCGGTGCGTCACGGGTTACCGGTCGTCGGTGAAATTCCGGCGAGTATAGACGGGGTTTATTTAAGAAATGGAGCTAACCCATTGTTTGAGCCGACTTCCGGCCACCATTTGTTCGACGGCGATGGGATGATTTACGCCGTTAAGTTCGATAACGGCTCGGCTAGCTACGCTTGCAGGTTTACTGAGACTCAGCGGCTTGTTCAAGAACGGGCTCTTGGTAAGCCGGTTTTTCCGAAAGCCATCGGCGAATTACATGGCCATTCCGGGATAGCTAAGCTGGTGCTTTTTTATGCTCGCGGCTTATGTGGCTTGATTGACCATAGCCAAGGCATCGGCGTGGCTAACGCCGGCTTGGTTTATTTTAACAACCGGCTTTTAGCCATGTCGGAAGATGATTTGCCTTATCACGTGCGTGTCACGCCTTCTGGTGACTTGAAAACAGCCGGACGTTATAAGTTTGACGATCAATTGAACTCCACCATGATCGCCCACCCGAAACTTGACCCGGTTTCCGGCGAGCTTTTTGCATTGAGCTACGACGTCATTCAGAAGCCGTATTTGAAATATTTCTGGTTTTCGCCGGACGGCGTGAAATCAAACGACGTCGCGATCGATTTGGGGAAACCGACGATGGTTCATGATTTCGCGATCACGGAGAATTTCGTGGTGGTGCCGGACCACCAGGTGGTGTTCAAGATGTCGGAGATGATCACCGGCGGGTCGCCGGTGGTGTACGACAAAGAGAAAATGTCGCGTTTCGGTGTGCTTGATAAGTACGCAGTTGACGGGTCGGGTATAAAATGGGTCGAAGTTCCGGATTGTTTTTGTTTTCATCTCTGGAACGCATGGGAAGAACCCGAATCCGACGAGATCGTTGTAATCGGATCCTGCATGACTCCGGCGGACTCAATTTTCAACGAATGTAACGAAGAACTCAAATCCGTCTTATCGGAAATCCGTCTCAACCTCACCACCGGAAAATCGACACGACGGCCGATAATCTCGCCGGAAAACGACGTCAATTTGGAAGCCGGAATGGTGAACAAAAACCTCCTCGGCCGGAAATCGAAATTCGCGTACCTAGCCATCGCCGAACCCTGGCCAAAAGTCTCCGGTTTCGCCAAAGTCGATCTCTCCACCGGCGACACCGAGAAATTCTTTTACGGCGACGAAAAATACGGCGGCGAGCCACTTTTTCTTCCCGCCGATTCAAATTCCGACGCCGAAGACGACGGCCACATCTTGGCGTTCGTTCACGACGAGAAGACATGGGAATCGGAGCTCCAAATCGTGAATGCAATGACGATGGAGTTAACGGCGACGGTGAAGCTGCCGTCGAGGGTTCCGTACGGGTTTCACGGAACGTTTATTAACGGAAAAGATTTAGCAACGCAAGCGTGA	1776	49.77	MATSSTSTSTWNNPKPNFLFSSKELFPNSNSTSITFSKKTIRSALQTPKILQLPKQSVGKRSTIPVEPSSSPAVQQNWNLLQKLAAMALDAVEDGLIAREKRHRLPKTADPNVQIAGNFSPVPEQPVRHGLPVVGEIPASIDGVYLRNGANPLFEPTSGHHLFDGDGMIYAVKFDNGSASYACRFTETQRLVQERALGKPVFPKAIGELHGHSGIAKLVLFYARGLCGLIDHSQGIGVANAGLVYFNNRLLAMSEDDLPYHVRVTPSGDLKTAGRYKFDDQLNSTMIAHPKLDPVSGELFALSYDVIQKPYLKYFWFSPDGVKSNDVAIDLGKPTMVHDFAITENFVVVPDHQVVFKMSEMITGGSPVVYDKEKMSRFGVLDKYAVDGSGIKWVEVPDCFCFHLWNAWEEPESDEIVVIGSCMTPADSIFNECNEELKSVLSEIRLNLTTGKSTRRPIISPENDVNLEAGMVNKNLLGRKSKFAYLAIAEPWPKVSGFAKVDLSTGDTEKFFYGDEKYGGEPLFLPADSNSDAEDDGHILAFVHDEKTWESELQIVNAMTMELTATVKLPSRVPYGFHGTFINGKDLATQA	591

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Armi1g00515	591	PANTHER	BETA-CAROTENE DIOXYGENASE	103	583	IPR004294	GO:0009570(PANTHER)\|GO:0010436(PANTHER)\|GO:0016121(PANTHER)\|GO:0016702(InterPro)
	Armi1g00515	591	Pfam	Retinal pigment epithelial membrane protein	122	582	IPR004294	GO:0016702(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Armi1g00515	K09840	9-cis-epoxycarotenoid dioxygenase [EC:1.13.11.51]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	20258	Armi1g00515	Armi7g00415
	20259	Armi1g00515	Armi8g02408

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Armi	Armi-Chr1:10648651	Armi8g02408	Armi-Chr8:91301109	dispersed
	Armi	Armi-Chr15:62827908	Armi1g00515	Armi-Chr1:10648651	transposed
	Armi	Armi-Chr6:1269856	Armi1g00515	Armi-Chr1:10648651	transposed
	Armi	Armi-Chr1:10648651	Armi7g00415	Armi-Chr7:7801526	wgd
	Armi	Armi-Chr1:10648651	Armi8g02407	Armi-Chr8:91285024	wgd