Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Armi1g00525	ATGGAGGTAACCAATGTGAGTGAGTATCAGGCAATTGCCAAGGAGAAGTTGCCAAAGATGGTCTATGACTACTATGCTTCTGGTGCTGAGGACCAGTGGACTCTAGAAGAGAACCGAAATGCTTTCGCAAGAATCCTGTTTAGGCCCCGGATTCTTATTGATGTGAGCAAGATAGACATGACCACAACCATTTTGGGATTCAAGGTGTCTATGCCCATTCTGATAGCCCCAACAGCAATGCAGAAGATGGCTCACCCTGAAGGTGAATATGCAACAGCTAGAGCCGCATCTGCAGCTGGGACTATTATGACACTGTCATCGTGGGCGACGTCTAGTGTTGAGGAGGTTGCTTCAACAGGACCTGGAATCCGCTTCTTCCAGCTTTACGTGTACAAGAACCGTAACGTTGTGGCTCAACTTGTGAAAAGAGCTGAACGAGCCGGCTTCAAAGCTATAGCTCTAACAGTTGACACACCAAGACTCGGGCGTCGAGAAGCTGATATCAAAAACAGATTCACTTTACCGCCATTTTTGACATTGAAGAACTTTGAGGGTCTGGACCTTGGCAAGATGGATGAAGCTAACGACTCTGGATTAGCTTCTTACGTTGCGGGTCAGATCGACCGCACTTTGAGCTGGAAGGATGTGAAGTGGCTTCAGACGATTACTACAATGCCAATCCTTGTGAAGGGTGTGATCACTGCCGAGGATACAAGGTTAGCTATTCAAGCTGGAGCAGCCGGTATTATTGTATCCAATCATGGAGCCCGTCAACTTGATTACGTCCCGGCCACCATCATGGCTTTGGAGGAGGTTGTGAAAGCTGCACAAGGGCGTGTACCTGTATTCTTGGATGGTGGTGTCCGGCGTGGTACAGATGTTTTCAAGGCTCTGGCGCTTGGAGCTTCCGGCATATTTATTGGAAGACCTGTGGTGTTTTCCTTGGCTGCTGAAGGAGAAGCTGGAGTGAGGAAAGTGCTTCAGATGTTACGCGAAGAATTCGAACTAACCATGGCATTAAGTGGTTGTACCTCGCTCAAACAGATTACCCGAAATCACATTGTCACCGAGTGGGATGCTCCTAGGGCTCGTCCTGCACCAAGGTTATAG	1110	48.47	MEVTNVSEYQAIAKEKLPKMVYDYYASGAEDQWTLEENRNAFARILFRPRILIDVSKIDMTTTILGFKVSMPILIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKNRNVVAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFTLPPFLTLKNFEGLDLGKMDEANDSGLASYVAGQIDRTLSWKDVKWLQTITTMPILVKGVITAEDTRLAIQAGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRVPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMLREEFELTMALSGCTSLKQITRNHIVTEWDAPRARPAPRL	369

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Armi1g00525	369	Pfam	FMN-dependent dehydrogenase	13	355	IPR000262	GO:0016491(InterPro)
	Armi1g00525	369	ProSitePatterns	FMN-dependent alpha-hydroxy acid dehydrogenases active site.	252	258	IPR008259	GO:0016491(InterPro)
	Armi1g00525	369	Gene3D	Aldolase class I	1	369	IPR013785	-
	Armi1g00525	369	PANTHER	S -2-HYDROXY-ACID OXIDASE-RELATED	2	353	-	GO:0005777(PANTHER)\|GO:0008891(PANTHER)
	Armi1g00525	369	CDD	alpha-hydroxyacid-oxid-FMN	7	351	IPR012133	GO:0010181(InterPro)\|GO:0016491(InterPro)
	Armi1g00525	369	PIRSF	Al-hdrx-acd-dh	1	358	IPR012133	GO:0010181(InterPro)\|GO:0016491(InterPro)
	Armi1g00525	369	FunFam	peroxisomal (S)-2-hydroxy-acid oxidase GLO1	1	366	-	-
	Armi1g00525	369	SUPERFAMILY	FMN-linked oxidoreductases	2	356	-	-
	Armi1g00525	369	ProSiteProfiles	FMN-dependent alpha-hydroxy acid dehydrogenase domain profile.	1	359	IPR037396	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Armi1g00525	K11517	(S)-2-hydroxy-acid oxidase [EC:1.1.3.15]
	Armi1g00525	K00101	L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	20261	Armi1g00525	Armi8g02406

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Armi	Armi-Chr3:19027269	Armi1g00525	Armi-Chr1:11096610	transposed
	Armi	Armi-Chr7:395809	Armi1g00525	Armi-Chr1:11096610	transposed
	Armi	Armi-Chr1:11096610	Armi7g00412	Armi-Chr7:7744445	wgd
	Armi	Armi-Chr1:11096610	Armi8g02406	Armi-Chr8:91225711	wgd