AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00532 ATGAGGGAAGAAGGAATGAGTTCATCGGGAGACCCGTTACTTTTCTCCAATTCCCCCCCTCCTCCCCCTCCTCCACCTGCTGCTGCCAGTTCTGCTGGCGCATCATCACCGGCTTTTGCCACCAATGCTGGCAGTACAGATTGGTTGAGTCATGGTCAGGGATCTAAAGCAGGTTCTCTATCTCGGATTAGTTCGCAGCCTATATGGATTTCATTGAGTACAAGTGCTGGTGGTTCAGCTCTTGGCTCGTCCCAACCTTCATGTAGACCATGGGAAAGGGGTGATCTACTAAGACGATTGTCCACATTCAGGCCTGCAAATTGGTTTGGAAAGCCTAAGGCTGCTAGTTCGCTTGCCTGTGCTAGGAGAGGCTGGGTGAATGTGGATGTTGATAAGATTCAGTGTGAGTCTTGTGGTGCAAATCTGAAATATAATGCACCAGATTCATGGACTCCTACAGAAGGCGATAATGGTGGAGAAGAATTTGGCAACCAGCTTGATGAAGGACACAATGTCACTTGTCCTTGGAGAGGAAACAGCTGTGCTGAAAGCTTAGTGCAATTCCCTCCTACTCCTCCATCAGCCCTAGTAGGGGGTTACAAGGATCGCTGCGATGGACTCCTTCAGTTTCCTTATCTACCAGTTGTGGTTGCTTCAGCGCTGGAGCAGATGAGGGTTTCAAGAGGTCCCGAAATTGACCGCTTTCTGGTTCAGTCAAGTGCTTTTTCGGTTGGGGAATCTGGGTTTAAGGCAGAAATTACATCTGATATATGCATATATTCACGTGCCCAGAAGTTGATAAGCCTTTGTGGATGGGAGCCAAGATGGCTTTCAAATGTTCAAGACTGTGAAGAGCATTCTGCTCAATCAGCTAGGAATGGATGTTCTTTCAGTCCCATTAAAGATTGTGACCCTCTGCAAGATCGAGGCCCTAACAAGAAAATATTGTCTGCTTCAACCAAGAAGGGTCCTCTAAAGAGTGAACCATTGTCAAAATTTGAATCTAGATCCCCTTTGTTAGATTGTAGCTTATGTGGTGCCACAGTGAGAATCTTGGACTTTCTGACTGTTGCTCGTCCTGCTTGTTTTGCTCCTAACAACATTGATGTTCCTGAAACAAGTAAAAAGATGGCACTTACTCGTGGTGTGAGTGCAGCTAGTGGAATTAGTGGGTGGGTTGCCGCAGATGGCGTGGAGAAAGAGCAGACAGAGGACATTGATGAAGCTGCAACTACTGGGGAGGGGAAGTCGACATCAAATATTGGGGTGGATTTAAATCTTACAATGGGCAGTGGATTTTCTACCGGCCATGGGCACAAGAGAGGGATATCTGAACTATACCAAGATGCAAATATAGGGAGGGATCTAGCTATTGGCCAGCCAGCTGGTAGTGAGGTTGGTGATCGTGCAGCATCATATGAATCCCGAGGTCCTAGTACTTCCAAACGGAACTTGGATGAAGGTGGGAGTACTGTTGATAGGCCACATGGGATGATTCGTCAGGCGGATAGTGTCGAGGGTGTTGTCATTGACCGTGATGGTGATGAAGTAAATGATAGCAAGTTGTCTCCCGGCCCTTCTAAACGTGCACGTGAGTCTCATGCCTCTGAATCCTACCAGCCATCATACAGGAGAGATGCATCTGGTGCCGGTCCTAGCCAGACCTTATATTTTGATATCGGAAAGGTTGGTCCTCCCAGTCAAGGACATGAACCAGCTGCTGGCTATCCATCCACTAAAGATTCAGCAAGAGCTTCCTCTGTTATTGCAATGAATACGATTTGTCATAGTGCAGATGATGATTCTATGGAAAGCGTTGAAAATCATCCTGGATATGTAGATGAAGCCAATTATCCTTCTTTTTCAGCACCCAAGAGCCCTGATATCAACGAAACTTCAGATATGAACCTTAGTATTCAGGCACAGCAAAGCGCTTGCCCTCCTGCAGTTAGAGTCGCTGGCGAGATCGGTGTTAGCAGCACCAATGATGAGGAAGTACTCAATACCGAGACTGCCACTGTTCATGGGAGGGATGGCCCTAGTTTTGCTATTAGTGGAGGAAGTGTTGGAATGGGTGCTAGTCATGAAGCGGAGATTCATGGCTCTGATGCTCTGATTCATAGGACGGAAAGTGTGGTTGGTGACATGGAACCAGTTACTGGAGTGACCGAAAACCAAGGTCAAACTGGTGAATTTGCTGCAGATCCTGGACCGATGGGTGATTTTGTCCCTGTAGAACTGCAACAAGAATATCCTCGTGGTGAGAGTCAAGAGCTAATGTCGCGGTCAGGAGGTAGGGCAGATAGTGGCTCAAAAATTGTTGGTTCAGCCAAGGCGGAATCTGTTGAGAGCGGTGAAAAGACCAGCGACTTGAATCTCTTGCCCAATGAACAAAGCTCCCACCCTTCTCTCTCTTGCAATGCAGTTGTATGTTCTGGGCTTGAAGCATCTAAGGATGAAGTAATGCAGGTAGGCAAGTCATCTCCTACAGATGAATGTGGCTACCCTAGTTATCTGGCTGCAAATGGGATAGGGCCTCCAAATGGAGAAAGCAACTTTGAAGAACCTGTGGAGTTTGATCCAATTAAGCATCACAATTTTTTCTGTCCTTGGGTGAATGGCAATGTTGCTGCAGCTGGTGTTAGTGTTGGTAATGGTGCCAGTTCCAGCGCTAGTGCCGTAGCCCTTTGTGGCTGGCAGCTGACGTTAGATGCTTTAGATGGCTTTCAAGGGCCTGAACCAAATCAAACCGTTGAATCTGAATCCGCTGCTTCGCTGTACAAGGATGATCATCAAGTTTCTGGTCGAAAACTCATGGCACGACGATCCTTCAGCCGAAGCCATGGCCAAAATTGA 2856 47.34 MREEGMSSSGDPLLFSNSPPPPPPPPAAASSAGASSPAFATNAGSTDWLSHGQGSKAGSLSRISSQPIWISLSTSAGGSALGSSQPSCRPWERGDLLRRLSTFRPANWFGKPKAASSLACARRGWVNVDVDKIQCESCGANLKYNAPDSWTPTEGDNGGEEFGNQLDEGHNVTCPWRGNSCAESLVQFPPTPPSALVGGYKDRCDGLLQFPYLPVVVASALEQMRVSRGPEIDRFLVQSSAFSVGESGFKAEITSDICIYSRAQKLISLCGWEPRWLSNVQDCEEHSAQSARNGCSFSPIKDCDPLQDRGPNKKILSASTKKGPLKSEPLSKFESRSPLLDCSLCGATVRILDFLTVARPACFAPNNIDVPETSKKMALTRGVSAASGISGWVAADGVEKEQTEDIDEAATTGEGKSTSNIGVDLNLTMGSGFSTGHGHKRGISELYQDANIGRDLAIGQPAGSEVGDRAASYESRGPSTSKRNLDEGGSTVDRPHGMIRQADSVEGVVIDRDGDEVNDSKLSPGPSKRARESHASESYQPSYRRDASGAGPSQTLYFDIGKVGPPSQGHEPAAGYPSTKDSARASSVIAMNTICHSADDDSMESVENHPGYVDEANYPSFSAPKSPDINETSDMNLSIQAQQSACPPAVRVAGEIGVSSTNDEEVLNTETATVHGRDGPSFAISGGSVGMGASHEAEIHGSDALIHRTESVVGDMEPVTGVTENQGQTGEFAADPGPMGDFVPVELQQEYPRGESQELMSRSGGRADSGSKIVGSAKAESVESGEKTSDLNLLPNEQSSHPSLSCNAVVCSGLEASKDEVMQVGKSSPTDECGYPSYLAANGIGPPNGESNFEEPVEFDPIKHHNFFCPWVNGNVAAAGVSVGNGASSSASAVALCGWQLTLDALDGFQGPEPNQTVESESAASLYKDDHQVSGRKLMARRSFSRSHGQN 951
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00532 951 MobiDBLite consensus disorder prediction 1 57 - -
Armi1g00532 951 MobiDBLite consensus disorder prediction 458 582 - -
Armi1g00532 951 MobiDBLite consensus disorder prediction 34 57 - -
Armi1g00532 951 MobiDBLite consensus disorder prediction 525 539 - -
Armi1g00532 951 MobiDBLite consensus disorder prediction 913 933 - -
Armi1g00532 951 MobiDBLite consensus disorder prediction 306 331 - -
Armi1g00532 951 MobiDBLite consensus disorder prediction 754 789 - -
Armi1g00532 951 Pfam C3HC zinc finger-like 90 213 IPR012935 GO:0008270(InterPro)
Armi1g00532 951 MobiDBLite consensus disorder prediction 15 30 - -
Armi1g00532 951 PANTHER NUCLEAR-INTERACTING PARTNER OF ALK 1 949 - GO:0005634(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00532 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
20263 Armi1g00532 Armi8g02400
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr1:11362354 Armi2g01134 Armi-Chr2:33234608 dispersed
Armi Armi-Chr1:11362354 Armi8g02400 Armi-Chr8:91113877 wgd