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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00575 ATGGCCAAGCAAAAGATTGTGGTGAAGGTGACGATGAACAACGACAAGAAATCTCGCAAGGCTCTGAAGATCGCCGTTAGTCTCTGCGGTGTTGAATCGGCATCATTCGTAGGATCAGATAAAGACCAGATCGCAGTGACTGGTGAAGGAATTGATTCAGTGGAATTGACGACTTTGCTACGAAAAGGTGTAGGATACACAGAGCTAGTGAGTGTTGGTCCAGTGGAGGAGAAGAAACCCGAAGCCAAAGAATCGAAGGCCACTGTGGAAGTTCATCCTTACCAGTACTACTATAATTACTACCCCACTCCCTACTATGTATATGGAATGTGA 333 45.65 MAKQKIVVKVTMNNDKKSRKALKIAVSLCGVESASFVGSDKDQIAVTGEGIDSVELTTLLRKGVGYTELVSVGPVEEKKPEAKESKATVEVHPYQYYYNYYPTPYYVYGM 110
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00575 110 PANTHER OS04G0464100 PROTEIN 4 89 IPR044296 -
Armi1g00575 110 Gene3D - 1 78 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00575 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr1:12198229 Armi1g00575 Armi-Chr1:12778956 dispersed
Armi Armi-Chr1:12228241 Armi1g00575 Armi-Chr1:12778956 dispersed
Armi Armi-Chr1:12712537 Armi1g00575 Armi-Chr1:12778956 dispersed
Armi Armi-Chr1:12778956 Armi4g00324 Armi-Chr4:8472605 dispersed
Armi Armi-Chr1:12737536 Armi1g00575 Armi-Chr1:12778956 proximal