Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Armi1g00626	ATGAGTTGTGGGATTAAGACATTTACAGTCAGCAACCATAACTGTAGCGAGTTATGGTCAAAGAGAGCTCCAATAGAGGCTGCATTCTGTTCTTCTCGTTCCTTGTATGAATTCTGCCCTCTTCTCCGACCTCGTAGCTCCGGTGTACTAACACTTGGTGTTTCTGTTTCCGGTTATCCGAGAGTACATGGCAATAGTTTACTAACTTCCCGGTACACGTTGGCGGCATCTCATGAGGTGCATGCGATGAGGAATGCTACTAGTGAGTCGGTAGTTGATGAACTCAAAAGTAAAGAGTGGGAAATTGGGGTTTTAAAGGATGAAATAGCTGCTATGCAGGGAATGCTGATAAGAAGAACACCGCCAACTGGGCCTCCTCCTCACTATGTTGGTACTTTTGAGTTTTTACAGAATGAAGATAATACTCCTCGTAACAAACTGGAGGAAATTGTATGGTACAAATATGGAGAGGTTAACCAGATGAAGGAGAAAAATGCATTATGTTCACTAAAGAGATTCATCGACAATGCTCCTCCTACACGAGACTTTATTGGATCTCTTAAGGAGTCATATTTACGAACCGGATTGCCCGGTTTAATCGCTGAAGTAAAAAAGGCTTCACCTAGTAGAGGAGTTCTAAGGGAAAATTTTCATCCGGTTGAAGTTGCAAAAGCTTATGAGAAAGGTGGAGCAGCATGCCTAAGTGTTTTGACCGATGCAAAATATTTTCAGGGAAGCTTCGAGAATCTAGAGGCTATACGGAATGCTGGAGTCAAGTGCCCTCTCTTGTGCAAAGAATTCATTGTGGATGCATGGCAACTCTACTATGCTCGAACAAAGGGTGCCGATGCTGTTCTGTTGATTGCCGCTGTTTTACCAGATATTGACATCAAATATATGCTTACGATATGCAAAAAGATTGGACTGGCTGCACTTGTTGAGGTACATGATGAGAATGAAATGGATCGCATGCTTGCAATTGATGGAATTGAACTCATTGGCATCAACAATCGTAACCTTGGAACATTCAAAGTCGATATCAGTAACACAAAGAAGTTGCTTGAAGGTGAGCGTGGGGAGAAACTCCGGCAGAAAAACATAATAGTGGTTGGGGAGTCTGGACTGTTTACTCCTGCTGACATTGCCTATGTACAAGAAGCTGGCGTGAAAGCTATATTGGTCGGGGAGTCAATTGTGAAGCAGGAAGATCCAACAAAAGGAATTAGAGATCTTTTTGGAAAAGATATATCGGCGTAG	1257	42.64	MSCGIKTFTVSNHNCSELWSKRAPIEAAFCSSRSLYEFCPLLRPRSSGVLTLGVSVSGYPRVHGNSLLTSRYTLAASHEVHAMRNATSESVVDELKSKEWEIGVLKDEIAAMQGMLIRRTPPTGPPPHYVGTFEFLQNEDNTPRNKLEEIVWYKYGEVNQMKEKNALCSLKRFIDNAPPTRDFIGSLKESYLRTGLPGLIAEVKKASPSRGVLRENFHPVEVAKAYEKGGAACLSVLTDAKYFQGSFENLEAIRNAGVKCPLLCKEFIVDAWQLYYARTKGADAVLLIAAVLPDIDIKYMLTICKKIGLAALVEVHDENEMDRMLAIDGIELIGINNRNLGTFKVDISNTKKLLEGERGEKLRQKNIIVVGESGLFTPADIAYVQEAGVKAILVGESIVKQEDPTKGIRDLFGKDISA	418

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Armi1g00626	418	Hamap	Indole-3-glycerol phosphate synthase [trpC].	145	413	IPR013798	GO:0004425(InterPro)
	Armi1g00626	418	SUPERFAMILY	Ribulose-phoshate binding barrel	154	413	IPR011060	-
	Armi1g00626	418	ProSitePatterns	Indole-3-glycerol phosphate synthase signature.	199	217	IPR001468	GO:0004425(InterPro)\|GO:0006568(InterPro)
	Armi1g00626	418	Pfam	Indole-3-glycerol phosphate synthase	147	411	IPR013798	GO:0004425(InterPro)
	Armi1g00626	418	Gene3D	Aldolase class I	139	417	IPR013785	-
	Armi1g00626	418	CDD	IGPS	183	411	IPR013798	GO:0004425(InterPro)
	Armi1g00626	418	PANTHER	TRYPTOPHAN BIOSYNTHESIS PROTEIN	86	414	IPR045186	GO:0000162(PANTHER)\|GO:0004425(PANTHER)\|GO:0004425(InterPro)\|GO:0004640(PANTHER)
	Armi1g00626	418	FunFam	Indole-3-glycerol phosphate synthase chloroplastic	139	417	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Armi1g00626	K01609	indole-3-glycerol phosphate synthase [EC:4.1.1.48]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	20270	Armi1g00626	Armi7g00376

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Armi	Armi-Chr1:14682013	Armi2g01658	Armi-Chr2:60155314	dispersed
	Armi	Armi-Chr1:14682013	Armi1g00627	Armi-Chr1:14701615	tandem
	Armi	Armi-Chr1:105155286	Armi1g00626	Armi-Chr1:14682013	transposed
	Armi	Armi-Chr1:14682013	Armi7g00376	Armi-Chr7:6924155	wgd