Gene detail

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Armi1g00627	ATGAAGGATGAAGATGATACTTCTCGTAACAAACTAAAGGAAATTGTACGGAACAAATATTTAGAGGTTACCCAGATGAAGGAAAAAAATTCATTATTTTCATTAAATAAAGCTCTCGACAATGCTCCTCCTCCCAGAGACTTTAGAGGAGCTCTTAAGATCTCATATGTACGAACAGGATCACCTGGTCTAATTGCTGAAGTGAAAAAGGCTTCACCAAGTAAAGGAGTTTTAAGGGAAGATTTTCATCCTGTTGAAATTGCAAAAGCTTATGAGAACGGTGGAGCAGCGTGCCTTAGTGTTTTAACCGACATGGAATATTTTCAGGGAAGCTTTGAGTATCTAGAGGATATACGGAATTCTGGAGTCAAGTGCCCTCTCTTGTGCAAAGATTTCATTGTGGATGTAGTGCAACTCTACTATGCTCGAATAAAGGGCGCTGATGCTGTTCTGTTGATCGCAGCTGTTTTATCAGATATTGACATCAAATATATGCTCAAGATTTGCAAAAAGATTGGATTGGCAGCACTAGTTGAGGTACACGATGAGAATGAAATGGATCGCATGCTGGGAATTGATGAAATCGAACTCATTGGCATCAACAATCGTAACCTTGAAACATTTGAAGTGGATATCAGTAGCACAAAGAAGTTGCTTGAAGGTGAGCGTGGAGAGAAGATCCGGCAGAAAGGCATAACCGTGGTTGGGGAGTCTGGATTGTTCACTCCTGCTGACGTTGCCTATGTACAAGAAGCTGGCGTGAAAGCTATATTGGTCGGGGAGTCGATTGTGAAGCCGAAAGATCTGATAAAAGGGATTAGGGAACTATTTGGGAAAGATATATCGAATTAA	852	40.73	MKDEDDTSRNKLKEIVRNKYLEVTQMKEKNSLFSLNKALDNAPPPRDFRGALKISYVRTGSPGLIAEVKKASPSKGVLREDFHPVEIAKAYENGGAACLSVLTDMEYFQGSFEYLEDIRNSGVKCPLLCKDFIVDVVQLYYARIKGADAVLLIAAVLSDIDIKYMLKICKKIGLAALVEVHDENEMDRMLGIDEIELIGINNRNLETFEVDISSTKKLLEGERGEKIRQKGITVVGESGLFTPADVAYVQEAGVKAILVGESIVKPKDLIKGIRELFGKDISN	283

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Armi1g00627	283	Hamap	Indole-3-glycerol phosphate synthase [trpC].	10	278	IPR013798	GO:0004425(InterPro)
	Armi1g00627	283	ProSitePatterns	Indole-3-glycerol phosphate synthase signature.	64	82	IPR001468	GO:0004425(InterPro)\|GO:0006568(InterPro)
	Armi1g00627	283	CDD	IGPS	48	276	IPR013798	GO:0004425(InterPro)
	Armi1g00627	283	PANTHER	TRYPTOPHAN BIOSYNTHESIS PROTEIN	2	279	IPR045186	GO:0000162(PANTHER)\|GO:0004425(PANTHER)\|GO:0004425(InterPro)\|GO:0004640(PANTHER)
	Armi1g00627	283	Pfam	Indole-3-glycerol phosphate synthase	12	276	IPR013798	GO:0004425(InterPro)
	Armi1g00627	283	FunFam	Indole-3-glycerol phosphate synthase	8	280	-	-
	Armi1g00627	283	Gene3D	Aldolase class I	4	282	IPR013785	-
	Armi1g00627	283	SUPERFAMILY	Ribulose-phoshate binding barrel	18	278	IPR011060	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Armi1g00627	K01609	indole-3-glycerol phosphate synthase [EC:4.1.1.48]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Armi	Armi-Chr1:14701615	Armi7g00376	Armi-Chr7:6924155	dispersed
	Armi	Armi-Chr1:14682013	Armi1g00627	Armi-Chr1:14701615	tandem