AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00640 ATGGCGGTTTCCGGCGACACAGACGCCGTCGTATCGTACAATCTCGACTACCGGTCCAAGAAAGATGATGCATGGTACACATCGGCGGTAGTTCTGGAAAACGGAAAGCAGCTCCGCGTGAAGTTCAGGGACTTTGTGGATAGCTACTTCGACGAGATTTTCTCCATCGCTGATTTCTCGACTAAGTCTGACCTACAAGAATTTATTCATAGATTTCGTCGTGTGTCCGTGCCGATCGAGGACAATGAGTGCTCCAGAGTGATAGCAGACATGGTGGTCTGTGCTACTTATAAAGGCGATGGATCAGTTCGATTCTTTGATGCCATTGTTGACGCTGTGCATTACAAAGAGCATACACCTGAGAAGTGTCTATGCACCTATTTACTGGTCTGGCAGCATGGTCCTGAAGAGGGCAATATAACAGCAACAAGTATTGAGGATATATGCCTTATTATACCTGGTGCTGTTGATCCCCAAGTGACCGGCTTTGCAAAGCTTGTGAAGGAAAAACTAGGTTTAGTTTACAAGAGACCATTTTTGTCTAGAAAAACAAGTCCAAACGAAACTCTCGACGAGTTACAGGATCTCGACAGTGCTGGATACAGTTCTTATGTTGGATCCTCTGAAGGGAAGGGAAGATTCTACCCTCAACTAAGTGATCATGACAGAGATCTGGGAGGCGTCAAAGAAACTGGCTGTCATCATTACATAATATTAGAGAATTTGGAGAAGGATCTATCTCCAACGTCAATGATGGAGTTTGTGCACGTGCAAACTTCAATTACCCCACAGGCATATCTTTTTCCAAGCTTGTCAGCAGAAACATTTGCAAGAGGAGCTGTTGTGGTGGATAGCAGGCCAAAGCTTAAGAGGATATATGAATTTTTAAGCAATCCAAATCACTTTATTGTATCTTCCTCTGGAAGGCCATGGGTAATAGCTGAAGCCGTGCTTAGGACTGGAACTTTTGACACAAACCTGCAGAGCTGTCAGCCATTGTCTGAGAACAAAAATACAGGGAGCGGGTTAAGGGTCGTGCGATTAGGAACAGAAGAATATAAGAGAGCTAAACAACGAAAAGATCTATATATGGAATTCCGTAAGCATCTAAATGGACTTCTCCAGAGGTTAGATACGGAGGAGAAGAAGTGTCTTCCTTCCGGTGCAAAAAAGTAG 1176 44.13 MAVSGDTDAVVSYNLDYRSKKDDAWYTSAVVLENGKQLRVKFRDFVDSYFDEIFSIADFSTKSDLQEFIHRFRRVSVPIEDNECSRVIADMVVCATYKGDGSVRFFDAIVDAVHYKEHTPEKCLCTYLLVWQHGPEEGNITATSIEDICLIIPGAVDPQVTGFAKLVKEKLGLVYKRPFLSRKTSPNETLDELQDLDSAGYSSYVGSSEGKGRFYPQLSDHDRDLGGVKETGCHHYIILENLEKDLSPTSMMEFVHVQTSITPQAYLFPSLSAETFARGAVVVDSRPKLKRIYEFLSNPNHFIVSSSGRPWVIAEAVLRTGTFDTNLQSCQPLSENKNTGSGLRVVRLGTEEYKRAKQRKDLYMEFRKHLNGLLQRLDTEEKKCLPSGAKK 391
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00640 391 Gene3D - 79 149 - -
Armi1g00640 391 PANTHER SAWADEE PROTEIN 11 383 - -
Armi1g00640 391 Pfam SAWADEE domain 13 149 IPR032001 GO:0003682(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00640 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr1:14789616 Armi1g00640 Armi-Chr1:15048105 dispersed
Armi Armi-Chr1:14865468 Armi1g00640 Armi-Chr1:15048105 proximal