Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Armi1g00644 | ATGGTAACAAACGTGGAACATTCGTCAACGGTTTCAGCAAATGAAGTTGATCATGTTGATATGCTAAATGCCTCATATGATGCTTATGAAGGAGTTATTATCAACATAAAAGAGAACATGGATGAAAATGTCTTTACAACTCTACTTCAAACATCAATATCCCAATGGAGGCAGCAGGGAAAGAAGGGAGTTTGGCTTAAACTGTCTCTTGAACTTGTGAATCTTGTTAAGCCTGCAGTGAAGGAAGGATTTTGGTATCATCACGCGGAACCAACGTACTTGATGCTCGTCTATTGGATCCCTAAAACTAATTGTACCCTCCCGGAAAACGCTTCCCATCGAGTTGGTGTTGCTGCTTTTGCCATGAACACCAAGGGGGAGGTTCTTGTAGTGCAAGAGAAAAATGGAACCTTCAAAGGCACGGGAGTGTGGAAATTACCAACCGGCGTTGTTGAGGAGGGTGAAGATATATGTACAGCTGCAATAAGGGAAGTGAAAGAAGAGGCTGGAATTGATACAGAATTTGTTGAAGTCCTTGCATTCAGGCAAAGCCACAAGTCATTCTTCAGCAAGTCTGATCTAATGTTTGTGTGTATGCTAAAACCAACATCTCATGATGTGGAAAAGCAAGATTCAGAGATTGAAGCAGCTCAGTGGATGCCAGTTGAAGAATATGTCAATCAGCCCTTTGTAAAGAAGCACAAATCCTTTGATTACATTGCTAAGATATGCATGGCAAAGAAAGATAACAAATTTGTTGGGTTCTCTGCATTGTCTACAGCAACTGCTACATCTGCCAAGAAGAGCTATTTGTATTCCAATTATCAACAACACTTGTCTGATTCTTAA | 849 | 40.64 | MVTNVEHSSTVSANEVDHVDMLNASYDAYEGVIINIKENMDENVFTTLLQTSISQWRQQGKKGVWLKLSLELVNLVKPAVKEGFWYHHAEPTYLMLVYWIPKTNCTLPENASHRVGVAAFAMNTKGEVLVVQEKNGTFKGTGVWKLPTGVVEEGEDICTAAIREVKEEAGIDTEFVEVLAFRQSHKSFFSKSDLMFVCMLKPTSHDVEKQDSEIEAAQWMPVEEYVNQPFVKKHKSFDYIAKICMAKKDNKFVGFSALSTATATSAKKSYLYSNYQQHLSDS | 282 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Armi1g00644 | 282 | Gene3D | - | 19 | 104 | - | - | |
| Armi1g00644 | 282 | ProSitePatterns | Nudix box signature. | 149 | 170 | IPR020084 | GO:0016787(InterPro) | |
| Armi1g00644 | 282 | Pfam | NUDIX domain | 113 | 236 | IPR000086 | - | |
| Armi1g00644 | 282 | CDD | Nudix-Hydrolase-12 | 113 | 244 | - | - | |
| Armi1g00644 | 282 | FunFam | Nudix hydrolase 8 | 114 | 252 | - | - | |
| Armi1g00644 | 282 | SUPERFAMILY | Nudix | 80 | 244 | IPR015797 | - | |
| Armi1g00644 | 282 | PANTHER | NUDIX HYDROLASE RELATED | 8 | 277 | IPR003293 | GO:0035529(PANTHER)|GO:0047631(PANTHER)|GO:0051287(PANTHER) | |
| Armi1g00644 | 282 | PRINTS | Anti-sense to fibroblast growth factor protein GFG signature | 110 | 128 | IPR003293 | - | |
| Armi1g00644 | 282 | PRINTS | Anti-sense to fibroblast growth factor protein GFG signature | 198 | 222 | IPR003293 | - | |
| Armi1g00644 | 282 | PRINTS | Anti-sense to fibroblast growth factor protein GFG signature | 72 | 90 | IPR003293 | - | |
| Armi1g00644 | 282 | ProSiteProfiles | Nudix hydrolase domain profile. | 112 | 244 | IPR000086 | - | |
| Armi1g00644 | 282 | Gene3D | Nucleoside Triphosphate Pyrophosphohydrolase | 114 | 253 | - | - | |
| Armi1g00644 | 282 | FunFam | nudix hydrolase 2 | 19 | 105 | - | - | |
| Armi1g00644 | 282 | Pfam | Nudix hydrolase domain | 22 | 100 | IPR040618 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Armi1g00644 | K26956 | ADP-ribose/NAD+ diphosphatase [EC:3.6.1.13 3.6.1.22] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Armi | Armi-Chr14:77418625 | Armi1g00644 | Armi-Chr1:15125435 | dispersed | |
| Armi | Armi-Chr1:15125435 | Armi5g00004 | Armi-Chr5:220660 | dispersed | |
| Armi | Armi-Chr1:15125435 | Armi9g02642 | Armi-Chr9:91016003 | transposed |