AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00648 ATGTCTAGAAATTATATCGATAGAGCCATGGCTTCCTACAAGAAACCACGTATGAGAGATGGTGCGATACGTAGATTCCTCTTTGTGGTATCTTTAACTTTGGCTGGGGTTCTTCTGTTATTCTTTCTTGTTGGAATGAATTCAGGTAGTGAGTTAACATTGAAAGAAAACTCGATTGAAATCGATGTTAGTAGTGGAGTTAGCTCTAACATATCTGGTTTGTTTGAGAGTATCAAGCTTCCGAAACATAATTATTTGTCGAAAATGTTGGAGAAGATGAACCAGTTGCCACCAAGAAACATGGATTTGTATCCGAATTTAGCTAAAGATCGTATAATTATCGTTCTTTATGTTCACAATCGTCCTCAATATCTCAAGTTAGTCGTGGATAGCCTTTCTCGTGTGTCGGGGATTAATGAAACTTTGTTGATCGTAAGTCACGATGGGTATTTCGAATCAATGAACAAGATTGTGGAGGGTATTAAGTTTTGTCAAGTGAAACAAGTGTTTGCTCCTTATTCGCCCCATATATTTTCGAATAGTTTTCCTGGCGTATCGCCTAATGATTGTAAGGAAAAAGATGATCCGATAGAGAAGAACTGTGAAGGGAGCACGGATCAATATGGGAATCATCGGTCACCCAAGATTGTGTCGTTAAAGCATCATTGGTGGTGGATGATGAACACGGTTTGGGATGGACTAAAAGAAACAATCGGCCATTCGGGTGATGTTCTTTTCATAGAAGAGGATCACTTCATCTTCCCAAATGCTTATCAAAACTTAAAGATTCTTACGGAATTGAAACCTACCAAATGCCCGGATTGCTATGCTGCAAATCTTGCTCCGAGTAACGTGAAATCTAGAGGAGAGGGTTGGGATAGTTTGATTGCTGAGCGGATGGGTAACATTGGTTACACGTTTAATCGGACTGTGTGGCGGAAAATCCATAGAAAAGCTAAGGAGTTTTGTTTCTTTGATGATTACAATTGGGATATAACCATGTGGGTGACTGTTTATCCCTCATTTGGTGGTTCGGTTTACTCTATGCGTGGACCAAGGGCTAGCGCGGTTCACTTTGGGAAGTGCGGGTTGCACCAGGGTCAGGGTGAGAATGCGGCTTGTGTCGATAACGGTGTGGTGAAGATCGACACGGAAGAGATCGATAAAGTTGCAAACATTAAACCAGAATGGGGGGTTCATGTGTTTAGAAATCAAGATGGGTATCAAGCTGGATTTCGCGGGTGGGGAGGTTGGGGAGATAAAAGAGACCACCAACTGTGCTTGGATTTCGCCAAAATGTATCACTTAAGAAGGAAAGCGTCGGCCTCCTGA 1332 41.89 MSRNYIDRAMASYKKPRMRDGAIRRFLFVVSLTLAGVLLLFFLVGMNSGSELTLKENSIEIDVSSGVSSNISGLFESIKLPKHNYLSKMLEKMNQLPPRNMDLYPNLAKDRIIIVLYVHNRPQYLKLVVDSLSRVSGINETLLIVSHDGYFESMNKIVEGIKFCQVKQVFAPYSPHIFSNSFPGVSPNDCKEKDDPIEKNCEGSTDQYGNHRSPKIVSLKHHWWWMMNTVWDGLKETIGHSGDVLFIEEDHFIFPNAYQNLKILTELKPTKCPDCYAANLAPSNVKSRGEGWDSLIAERMGNIGYTFNRTVWRKIHRKAKEFCFFDDYNWDITMWVTVYPSFGGSVYSMRGPRASAVHFGKCGLHQGQGENAACVDNGVVKIDTEEIDKVANIKPEWGVHVFRNQDGYQAGFRGWGGWGDKRDHQLCLDFAKMYHLRRKASAS 443
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00648 443 Pfam N-acetylglucosaminyltransferase II (MGAT2) 92 427 IPR007754 GO:0005795(InterPro)|GO:0008455(InterPro)|GO:0009312(InterPro)|GO:0016020(InterPro)
Armi1g00648 443 SUPERFAMILY Nucleotide-diphospho-sugar transferases 110 438 IPR029044 -
Armi1g00648 443 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 112 371 IPR029044 -
Armi1g00648 443 PANTHER BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE II 23 435 IPR007754 GO:0000139(PANTHER)|GO:0005795(InterPro)|GO:0006487(PANTHER)|GO:0008455(InterPro)|GO:0008455(PANTHER)|GO:0009312(InterPro)|GO:0016020(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00648 K00736 alpha-1,6-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase [EC:2.4.1.143]