Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Armi1g00658	ATGTCAACCACCTCGTCTTCTTCGTCACGCGACGATGGAGACGGTGGAAATGGCGGTGCCGGAGAGTTTGAAGGACCGTCGCATTCTCGTCAACGATTCAACAGCGACGTGTGGCCGGAGCCGTTCCTAGAAGCTCTCGCTACTCAAATCGCTATTGACGCCGCTCTCTCATTTGGCCGCCTTGCCGCTGCTCCGGCTCTCTTTAACCTCTTCCAGGTTTGTAGAACATGGAGAACTGTATCCCAGTCTGACCTCCTATGGCAAAACCTCACACGTCGTATTTGGCATCGCAACCACCTCCTCCATGCCTCTTGGCATGATGAATACATTTACCGCCACCGGACTGCTAGAAACTTCCGTGTCCGGAGGTGTTTGTACACCACCCTGCACTTCCCTCCGAACGATAACAACGCCAACGACCGCCTCTCATGCCGTTGCCTTGCACTATCTGATTACCACCTAGCCGCGGGATTTTCTGATGGGTCCGTTCGCCTATTTCACCTCCCCACAAGGCTCCACCTATCCACCTTCCACCCCCATCAACGCAATCACCTTGGCCCATTCTCCCGTGCTGTCTGTGGGATATTTTTTACAGATAACAGGCTAGTTTTTGCCTCCCTCGACGGTGATATTCATGTTGCATCCGTCAACGTTCCAGGAGTTCCACGGAGGGCTCACTTGGGAGATGTGGTCACTGATGGTGTCCTTGTGGATTTCACCGGTTGTAACCAGTGGTGGATCGGCCTTTACGCAGGTGTTCCAAACCGTGCATTCCATGTGCGAAATGGTAATACAGAAGAACTTGTATTCATTGGTGGCACATTGACCGACCCAGATGCCGTAACTGGTTGGCACTTGCTGACGGACCTAAGTGAGCAGGTTGGGCGAATCCGCATAACAAGTGAAGATCGGGCAGTGGCTTTCACAAGCAGCAAGGTTCTTGTATTCGATTTGAGAAGCCAAATGATATTAGGAGAAGAGGAGTTTGTAAGGCGAATTAACGTTGGTGCAGCTGATGCGTACGATAAGGCTCTGATGTTCGTAAATAGTAGGGGGGTAGGTAACGTGCGGGAGGTGGGTAGTTTGGAGGAAATGTGTAGGTTCATGGCGAGGGGCGGGGTGGTTGGTTGCATGAATGGTGGTTACTGTATAATATGCTGCAGTGGGGGCGGGATTAGGGTTTGGGAGTTGAATCACGGAGAGTACTTGTACAGTTTTAGAGAACGTGTCGGGGATAGTACGAGTGCCCTGACCGCGGATGAACGGTATGTAGCGGCTTGTACTAGTGACAACACCATTCACCTATGGGACTTTGGAGCACAACCACCCTTGTAG	1335	51.91	MSTTSSSSSRDDGDGGNGGAGEFEGPSHSRQRFNSDVWPEPFLEALATQIAIDAALSFGRLAAAPALFNLFQVCRTWRTVSQSDLLWQNLTRRIWHRNHLLHASWHDEYIYRHRTARNFRVRRCLYTTLHFPPNDNNANDRLSCRCLALSDYHLAAGFSDGSVRLFHLPTRLHLSTFHPHQRNHLGPFSRAVCGIFFTDNRLVFASLDGDIHVASVNVPGVPRRAHLGDVVTDGVLVDFTGCNQWWIGLYAGVPNRAFHVRNGNTEELVFIGGTLTDPDAVTGWHLLTDLSEQVGRIRITSEDRAVAFTSSKVLVFDLRSQMILGEEEFVRRINVGAADAYDKALMFVNSRGVGNVREVGSLEEMCRFMARGGVVGCMNGGYCIICCSGGGIRVWELNHGEYLYSFRERVGDSTSALTADERYVAACTSDNTIHLWDFGAQPPL	444

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Armi1g00658	444	SUPERFAMILY	WD40 repeat-like	107	438	IPR036322	GO:0005515(InterPro)
	Armi1g00658	444	ProSitePatterns	Trp-Asp (WD) repeats signature.	424	438	IPR019775	-
	Armi1g00658	444	Gene3D	-	43	121	-	-
	Armi1g00658	444	SUPERFAMILY	F-box domain	65	117	IPR036047	GO:0005515(InterPro)
	Armi1g00658	444	Gene3D	-	128	443	IPR015943	GO:0005515(InterPro)
	Armi1g00658	444	MobiDBLite	consensus disorder prediction	1	32	-	-
	Armi1g00658	444	Pfam	WD domain, G-beta repeat	417	437	IPR001680	GO:0005515(InterPro)
	Armi1g00658	444	PANTHER	WD40 REPEAT PROTEIN 12, 37	21	401	-	-
	Armi1g00658	444	SMART	WD40-4	361	396	IPR001680	GO:0005515(InterPro)
	Armi1g00658	444	SMART	WD40-4	170	215	IPR001680	GO:0005515(InterPro)
	Armi1g00658	444	SMART	WD40-4	122	167	IPR001680	GO:0005515(InterPro)
	Armi1g00658	444	SMART	WD40-4	399	437	IPR001680	GO:0005515(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Armi1g00658	-	-

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Armi	WD40	0.036	CL0186		TF	SAP