Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Armi1g00663 | ATGGATTCATCTTCCCAAATCCAACCCACAAACAAAAAGCTAAAACTCTCACTTAACAACGAAGACGATGAAGATCATCACACGATTCATGAAGAATATTTCGGATTGAAGGATTTACCCAATGATGTAATCCTAAATATACTCATCAAGCTCCCGATTTCATCCCTGATTCAGTTCCGGTTAGTTTGCAAGCCATGGAAACTTCTGTCGATCCACCCTGACCTTCACCGGCTCCACCAATCTGCGGCGGCGAACGACGACCCGACGTTGCTGTTCCACTCCGATTACCCGATCCGTAACCACCTCTCGTTTGTCGAATTATCATCCGATTGTGATCGTGACGATGATTGCAAGATTGTAAGAAAGATTTACACTCCGTTTTCCGGGTCCATGCCGGAATTCAACGTCGTCGGGTCATGTAACGGGTTGTTATGCTTATCGGATTCTCTTTACGGGGAACCCGTTTTCTTATTCAACCCGTTTTCCATGGATTATCTGGAGCTACCCAAATCTAAACAGTTTCAGGAACAGGAGGTTCTTTTCGGGTTCGGGTTTCATCCGGATTCAAACGAGTATAAGGTTGTCAAGATTGTGTATTACAGAACCTGGCAGGGACGACGTCGTATCATCCGAAAGAACCGGAATTACCCGAAATCCGAGGTTCAAATTCTCACCATTTCGAAGCAAATTGATGATAAGAGTTGTTCATGGAGGTGCCTTGGGAAAGTGCCTTACTTGCTTGACAAACAAGCAACAGAAGGTCCTGTAGTAAACGGGAGGATCCATTGGGTGAGTCGACCCGGCCGGATCACCGGTGTTCCGGGTCGAGCGATCGTTTCGTTTGATTTAAAAGACGAGTTGTTCAAAGTGGTGGCGAAGCCGAGTCATGCGGTCGTTAACCGTGGCAACAACTATCATTTGGCCGCTATCAAAGGGTGTTTAGCGGTGGTGATTTCGTGTGGGTATGGGAAGTTGGAGATTTGGGTGATGAAGGAATACGATCGTAAGGAATCTTGGGTGAAGGAGTTCGTCATCCATGGAGCGTTTCCGGCAAAAGTGGTGAGCCACGAGCATCGAGATTATGGGATTTGGAGGTGGCGTTCGGGTGGGAGGATGGTTCGGGTTCTTTGTGTTTTGAAGAATGGTGAGATCTTGATGGAATACAGAGGAGGGAGTTTGGTTAAATATGATCCTAAATGGAAAGAGTTTAAAGACGTCGTCTTTAATCGAATGCCGAAGTTGTTTCGGACGATTGTTCACGTTGGTACCCTCAATTGGGTTCGATAA | 1287 | 46.31 | MDSSSQIQPTNKKLKLSLNNEDDEDHHTIHEEYFGLKDLPNDVILNILIKLPISSLIQFRLVCKPWKLLSIHPDLHRLHQSAAANDDPTLLFHSDYPIRNHLSFVELSSDCDRDDDCKIVRKIYTPFSGSMPEFNVVGSCNGLLCLSDSLYGEPVFLFNPFSMDYLELPKSKQFQEQEVLFGFGFHPDSNEYKVVKIVYYRTWQGRRRIIRKNRNYPKSEVQILTISKQIDDKSCSWRCLGKVPYLLDKQATEGPVVNGRIHWVSRPGRITGVPGRAIVSFDLKDELFKVVAKPSHAVVNRGNNYHLAAIKGCLAVVISCGYGKLEIWVMKEYDRKESWVKEFVIHGAFPAKVVSHEHRDYGIWRWRSGGRMVRVLCVLKNGEILMEYRGGSLVKYDPKWKEFKDVVFNRMPKLFRTIVHVGTLNWVR | 428 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Armi1g00663 | 428 | Gene3D | - | 31 | 78 | - | - | |
| Armi1g00663 | 428 | Pfam | F-box associated domain | 257 | 345 | IPR013187 | - | |
| Armi1g00663 | 428 | Pfam | F-box domain | 37 | 76 | IPR001810 | GO:0005515(InterPro) | |
| Armi1g00663 | 428 | SUPERFAMILY | F-box domain | 32 | 90 | IPR036047 | GO:0005515(InterPro) | |
| Armi1g00663 | 428 | NCBIfam | F-box protein interaction domain | 138 | 378 | IPR017451 | - | |
| Armi1g00663 | 428 | ProSiteProfiles | F-box domain profile. | 33 | 82 | IPR001810 | GO:0005515(InterPro) | |
| Armi1g00663 | 428 | PANTHER | OS02G0783600 PROTEIN | 39 | 345 | IPR052361 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Armi1g00663 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 20278 | Armi1g00663 | Armi7g00362 | |
| 20279 | Armi1g00663 | Armi8g02313 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Armi | Armi-Chr1:15582012 | Armi8g02311 | Armi-Chr8:89654420 | dispersed | |
| Armi | Armi-Chr1:56165425 | Armi1g00663 | Armi-Chr1:15582012 | transposed | |
| Armi | Armi-Chr1:15582012 | Armi7g00362 | Armi-Chr7:6665988 | wgd | |
| Armi | Armi-Chr1:15582012 | Armi8g02308 | Armi-Chr8:89623970 | wgd |