AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00667 ATGGCTCTTCGGTCCATGGGAAGGCAAGGTGGCAACTCGATGGCGGTAAGTGGTGGTGGTAGTGGTGGATCTTCTATTGCTCTTCTGCAAGAAAGATTCAGGCAGCTGGAGAAAATGAGGGAAAAGAGAGAAGAAATGGAGTTATTAAAGTTGTTTCCTGGGTCTGAAACCACTAGTCAAACTAACCATTATGAGCCACCTGAGGTGTTGTTGGTGCACCCTGAAATGATCTTGCATAAGCCAACTAAAAAAACGACGCCCACAAGACCGTGTTTACAAGATCCGCTTTCTCTTGGACTCGACATATATACGAAGAAAGTAGAACCGAAAAAACCTGCAAAAACCCAACCATTTATGGACTTTTGGTCGGTGGATTCAACGTCTGTGAGCACGATGCGGGCTCATGACAAACCTGAAGTTGATACCTCCCTTCATCTGTAG 441 45.58 MALRSMGRQGGNSMAVSGGGSGGSSIALLQERFRQLEKMREKREEMELLKLFPGSETTSQTNHYEPPEVLLVHPEMILHKPTKKTTPTRPCLQDPLSLGLDIYTKKVEPKKPAKTQPFMDFWSVDSTSVSTMRAHDKPEVDTSLHL 146
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00667 146 Coils Coil 26 49 - -
Armi1g00667 146 PANTHER OS03G0593100 PROTEIN 6 146 - -
Armi1g00667 146 MobiDBLite consensus disorder prediction 1 23 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00667 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
20281 Armi1g00667 Armi7g00358
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr1:15692263 Armi7g00358 Armi-Chr7:6618483 wgd