Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Armi1g00674 | ATGTCGCTGAAACCCACTCTCAATCGCACTGATCGCGATCTCATCGCCCACCCTCTTCGTCCTTCCGGTGAAATTCATGTCATCGTGGGGCCAATGTTTGCTGGTAAAACTACAGCTCTTCTTCGCAGGATCAAATCTGAAGGAACTAATGGCAGGAAGGTAGCAATGATAAAGTCAAGCAAAGATAACCGATATGCTATTGATTCAGTTGTGACCCATGATGGGACGAAGTACCCTTGTTGGGCTCTGCCTGATTTGTTATCTTTCAAACAAAAACTTGGAGAAGAAGCTTATGAAAAGCTGGATGTTATTGGCATAGATGAGGCCCAATTCTTTGATGATCTCTATGACTTTTGTTGTAAAGCTGCTGACCATGATGGAAAAACTGTTATAGTTGCTGGCCTTGATGGTGATTACTTAAGAAGAAACTTTGGTCCAGTTCTTGATCTAGTACCCCTTGCTGATACCATAACCAAATTAACCGCTCGATGCGAACTATGTGGCAAACGAGCCCATTTCACCTTAAGGAAGACCAATGAGACAAAAACCGAACTTATAGGTGGTGCGGACGTGTATATGCCTGTTTGCCGTCAGCATTATGTTAACGGACAAATAGTGATCAAAGCTGCTAGAAATGTGATAGAGGAATCTCATAAGTTTCAGAGTGAACCAGAACCAATCTCAACAATTGTAACTTAA | 699 | 42.35 | MSLKPTLNRTDRDLIAHPLRPSGEIHVIVGPMFAGKTTALLRRIKSEGTNGRKVAMIKSSKDNRYAIDSVVTHDGTKYPCWALPDLLSFKQKLGEEAYEKLDVIGIDEAQFFDDLYDFCCKAADHDGKTVIVAGLDGDYLRRNFGPVLDLVPLADTITKLTARCELCGKRAHFTLRKTNETKTELIGGADVYMPVCRQHYVNGQIVIKAARNVIEESHKFQSEPEPISTIVT | 232 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Armi1g00674 | 232 | Gene3D | - | 17 | 160 | IPR027417 | - | |
| Armi1g00674 | 232 | Pfam | Thymidine kinase | 23 | 200 | IPR001267 | GO:0004797(InterPro)|GO:0005524(InterPro) | |
| Armi1g00674 | 232 | ProSitePatterns | Thymidine kinase cellular-type signature. | 187 | 200 | IPR020633 | GO:0004797(InterPro)|GO:0005524(InterPro) | |
| Armi1g00674 | 232 | Gene3D | - | 161 | 202 | - | - | |
| Armi1g00674 | 232 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 23 | 161 | IPR027417 | - | |
| Armi1g00674 | 232 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 161 | 203 | - | - | |
| Armi1g00674 | 232 | FunFam | Thymidine kinase | 19 | 160 | - | - | |
| Armi1g00674 | 232 | PANTHER | THYMIDINE KINASE | 17 | 222 | IPR001267 | GO:0004797(PANTHER)|GO:0004797(InterPro)|GO:0005524(InterPro)|GO:0046104(PANTHER) | |
| Armi1g00674 | 232 | FunFam | Thymidine kinase | 161 | 203 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Armi1g00674 | K00857 | thymidine kinase [EC:2.7.1.21] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Armi | Armi-Chr1:15850553 | Armi9g02621 | Armi-Chr9:90449580 | dispersed |