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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00687 ATGAGGCTAAACATCCAGAACAAGAGGAAGAGTCGTAAAGTGGCCGATGAAAGCATGTTTGGAGAAGGAAACGGAGCCGAGTTTCCAGATATAGTTGATCAACATACAATTAGGCAAGGATTCTCGAATGGTCTTTCTGTCATATACAGCATCGTACGAGCTCCGCTCTTACTTCTATCATGCCTATCATCCCACCCTCATATAAGTGGTGCTGCTGATGGAGTTTGGGTGTCTGGAGAGCTTGCACGAATATCTGAGGTTAATCATCTTATGGTCAACGATAGCATGCGTTACGCTATTTTGATGTAA 309 43.69 MRLNIQNKRKSRKVADESMFGEGNGAEFPDIVDQHTIRQGFSNGLSVIYSIVRAPLLLLSCLSSHPHISGAADGVWVSGELARISEVNHLMVNDSMRYAILM 102
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00687 102 MobiDBLite consensus disorder prediction 1 21 - -
Armi1g00687 102 PANTHER BNAC03G44900D PROTEIN 1 102 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00687 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
20286 Armi1g00687 Armi7g00348
20287 Armi1g00687 Armi8g02282
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr1:16116846 Armi7g00348 Armi-Chr7:6308288 wgd
Armi Armi-Chr1:16116846 Armi8g02282 Armi-Chr8:89071609 wgd