Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Armi1g00689	ATGTATGGAACTCGAAGCAAGAGGGATTTGTCTTTTGAAATCCAATCACAAATGACCATTTTGAGGCCAAGCATTCATGCAAGAAGGGCAAATATAGTTGTGAAGTTTCAAGATCTTTATGGGTTTACAGTGGAAGGCAATGTTGATGATGTAAACATATTGAATGAGGTGAGAGAGAAGGTGAGACAACAGGGTAAAGTTTGGTGGTCACTTGAAGCTAACAAAGGTGCAAATTGGTATCTCCAAACTTATGTATCTTCAGCCCTTAAATCATCCCTCAAGTTTTCAGTTTTAGTGAATGCCATCACCCTCAAGAGACTAATTAGGAAAGGGATACCTCCAGTTTTGAGGCCTAAAGTTTGGTTCTCTTTATCTGGGGCAGCTAAGAAGAAATCAACTGTGCCTGATAGCTATTATAGGGATCTAACAATAGCTGTTGAGGGCAAGATCACCCCTGCCACCAAACAGATAGATCATGATCTGCCACGAACTTTTCCTGGTCATCCATGGTTGGACACACCGGATGGTCATGCTGCTTTGAGACGTGTTCTTGTAGTGTACTCTTTTCGTGATTCTGATGTTGGTTATTGTCAGGGTTTAAATTACGTTGCAGCATTGTTGTTGCTTGTGATGAAAACAGAAGAAGAAGCGTTTTGGATGTTAGCAGTTTTGTTGGAAAATGTATTAGTCAACGATTGCTACACAAATAACTTATCAGGGTGCCATGTTGAACAACGGGTTTTCAAAGGTTTGCTGGCTAAAGAATGTCCGAGGGTATCTGCTCATTTAGAAGCTTTAGAGTTTGACGTCTCACTTGTTGCCACCGAGTGGTTTCTTTGCCTCTTTTCCAAGAGCCTGCCTTCGGAGACGACCATGCGAGTGTGGGATGTTCTCTTTTACGAAGGAGCGAAGGTTTTGTTTAATGTGGCTCTGGCGATATTCAAGATGAAGGAATTAGAGTTGCTCACAACACACCATATCGGTGATGTACTCAACATCATACATAATACAACCCATCATCTATTCGATCCCGATGAGTTACTAACGGTTGCGTTTGATAAGATCAGCTTCATGACTACAACGAATATTACAAGGCAAAGGAAGAAGCAAGAACCAGCGGTGATGGCTGAACTTGGGCAGAGGTTGAGACGGCTAAATACGACTAATATGGATGTCAACACCCGACTTCCGTGA	1194	42.13	MYGTRSKRDLSFEIQSQMTILRPSIHARRANIVVKFQDLYGFTVEGNVDDVNILNEVREKVRQQGKVWWSLEANKGANWYLQTYVSSALKSSLKFSVLVNAITLKRLIRKGIPPVLRPKVWFSLSGAAKKKSTVPDSYYRDLTIAVEGKITPATKQIDHDLPRTFPGHPWLDTPDGHAALRRVLVVYSFRDSDVGYCQGLNYVAALLLLVMKTEEEAFWMLAVLLENVLVNDCYTNNLSGCHVEQRVFKGLLAKECPRVSAHLEALEFDVSLVATEWFLCLFSKSLPSETTMRVWDVLFYEGAKVLFNVALAIFKMKELELLTTHHIGDVLNIIHNTTHHLFDPDELLTVAFDKISFMTTTNITRQRKKQEPAVMAELGQRLRRLNTTNMDVNTRLP	397

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Armi1g00689	397	Gene3D	-	96	126	-	-
	Armi1g00689	397	ProSiteProfiles	TBC-rab GAP domain profile.	111	302	IPR000195	-
	Armi1g00689	397	SMART	tbc-4	108	325	IPR000195	-
	Armi1g00689	397	FunFam	TBC1 domain family member 2A	233	377	-	-
	Armi1g00689	397	PANTHER	RAB GTPASE-ACTIVATING PROTEIN 1-LIKE	103	393	IPR050302	-
	Armi1g00689	397	Pfam	Rab-GTPase-TBC domain	116	322	IPR000195	-
	Armi1g00689	397	SUPERFAMILY	Ypt-Rab-GAP domain of gyp1p	238	352	IPR035969	-
	Armi1g00689	397	SUPERFAMILY	Ypt-Rab-GAP domain of gyp1p	101	262	IPR035969	-
	Armi1g00689	397	FunFam	TBC1 domain family member 2A	128	232	-	-
	Armi1g00689	397	FunFam	TBC1 domain family member 2B-like	96	126	-	-
	Armi1g00689	397	Gene3D	-	233	375	-	-
	Armi1g00689	397	Gene3D	putative rabgap domain of human tbc1 domain family member 14 like domains	127	232	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Armi1g00689	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	20289	Armi1g00689	Armi7g00344

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Armi	Armi-Chr1:16143038	Armi4g03923	Armi-Chr4:134817073	dispersed
	Armi	Armi-Chr1:16143038	Armi7g00344	Armi-Chr7:6247376	wgd
	Armi	Armi-Chr1:16143038	Armi8g02272	Armi-Chr8:88913962	wgd