AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00707 ATGGGTTCAAAGACATTCCTTCTTCTTACTTTAGCTTTTGTCGTCGTTCTCCTAGTTACCTCGGAAGTGGCTGCATCTAGCCGGCACTTGGCCTCAGACGATGGTGAAGTCGTAGAAGATGGCAAGTATGGTGGTGAGCTCCATGGACGCTACAATGTTGAGGGACTTGGAGGGTATAAGTATAACAATGGGGAAGGACAAGTTGCAGGTGATAAAAGTGATGATGATAATGGAGACGACCAAGATGGTGGGGGTTCGATACAAGCAGCACGTTGCAGACACCGTTGCTGTCATTACAACCACAAAGGATGGTGCACTAGATGCTGCCACTATGCAGAGGCAGTTGCGTATGAGAAAACTCGAAACTAA 369 47.43 MGSKTFLLLTLAFVVVLLVTSEVAASSRHLASDDGEVVEDGKYGGELHGRYNVEGLGGYKYNNGEGQVAGDKSDDDNGDDQDGGGSIQAARCRHRCCHYNHKGWCTRCCHYAEAVAYEKTRN 122
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00707 122 MobiDBLite consensus disorder prediction 32 46 - -
Armi1g00707 122 MobiDBLite consensus disorder prediction 62 87 - -
Armi1g00707 122 PANTHER NODULIN-24 1 119 IPR010800 -
Armi1g00707 122 Pfam Glycine rich protein family 1 85 IPR010800 -
Armi1g00707 122 MobiDBLite consensus disorder prediction 27 46 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00707 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr1:16733878 Armi1g00714 Armi-Chr1:17156277 dispersed
Armi Armi-Chr1:16733878 Armi1g00712 Armi-Chr1:17012718 proximal