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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00712 ATGGCTTCAAGGACATTCCTTCTTCTTGCCCTAGCTTTTGCTGTTGTTCTTCTCGTTACCTCAGAAGTGGCTGCAGCTAAAGACTTGGCCTCCAACCCTGACAGTGAGATTGATGGACGTGGAGGATACAACAAGGGTGGTGGTGGTGGAGGATACAACAACGGTGGTGGACGTGGAGGGTACAACAACGGTGGTGGACATGGTGGTCGTGGTGGAGGATACAATCGTTGCAGGCATGGTTGCTGTGGTGGACGTTACCATGGTGGGTGCAAGTGTTGCAGCTCATTCGCAGAGGCAACTGCATACAAGCAAACTCAAAATTGA 324 51.23 MASRTFLLLALAFAVVLLVTSEVAAAKDLASNPDSEIDGRGGYNKGGGGGGYNNGGGRGGYNNGGGHGGRGGGYNRCRHGCCGGRYHGGCKCCSSFAEATAYKQTQN 107
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00712 107 Pfam Glycine rich protein family 1 89 IPR010800 -
Armi1g00712 107 PANTHER NODULIN-24 1 105 IPR010800 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00712 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr1:17012718 Armi1g00715 Armi-Chr1:17172943 dispersed
Armi Armi-Chr1:16733878 Armi1g00712 Armi-Chr1:17012718 proximal
Armi Armi-Chr1:17012718 Armi1g00714 Armi-Chr1:17156277 proximal