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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00735 ATGAGGAAGCTCTACAACCACAATAAAGGCAAAATCCACCCATCACCACCGCCGGCCACCACCACCGCCGCCGGCCACTTATCTTTGCTGCCGGTGGCTATAGCCGCTCTCGCCGCCGCCCTTGCACCGGAAGACAAAGAAGTCTTGGCATACCTTCTCTCATGCTCTCTAACGACCACCACCAATAAAAACTTTTCCGGCAACACCAAACCCACCAACAAAACTAGCGGTGGAGACGGCGGCGGTGGCGGAAACCATCCACCGCAATTTAATTGCAACTGCTTTTCTTGCTACACAAGTTACTGGGTTCGTTGGGATGGTTCGCCAAACCGACAAATGATTCATGAAATCATCGATGCTTATGAAGATGGATTGATTGTTCATAACAAGAAGATCAGTGGGAAGAACAAGAAGGAAAGAAAGAAGAACAAAGTTTCTAGTTCGGCTTCCGGTTCAAATTCTCCACACGCGCCGCTTTCTGTCGCCGAGAAAGTCACTCACGCGCCGCCGAAAGTTGTGGAAAACAAGATTGAAGATAACGATGATGAAGATGAATTGATCATGGGGTCGTCATCGGAGAAAGGGTCGGTGAGAAATTTTGTAAGTTTCTTAGGAGAAAAGATTTGGGGTGTTTGGGGCTGA 642 48.6 MRKLYNHNKGKIHPSPPPATTTAAGHLSLLPVAIAALAAALAPEDKEVLAYLLSCSLTTTTNKNFSGNTKPTNKTSGGDGGGGGNHPPQFNCNCFSCYTSYWVRWDGSPNRQMIHEIIDAYEDGLIVHNKKISGKNKKERKKNKVSSSASGSNSPHAPLSVAEKVTHAPPKVVENKIEDNDDEDELIMGSSSEKGSVRNFVSFLGEKIWGVWG 213
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00735 213 MobiDBLite consensus disorder prediction 63 82 - -
Armi1g00735 213 PANTHER F12F1.11-RELATED 1 213 - -
Armi1g00735 213 MobiDBLite consensus disorder prediction 63 79 - -
Armi1g00735 213 MobiDBLite consensus disorder prediction 132 189 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00735 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
20291 Armi1g00735 Armi7g00338
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr1:17699312 Armi7g00338 Armi-Chr7:6096377 dispersed
Armi Armi-Chr3:946532 Armi1g00735 Armi-Chr1:17699312 transposed
Armi Armi-Chr1:17699312 Armi15g01627 Armi-Chr15:76822077 wgd