AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00739 ATGGACGTACTCTTCAATTCAATCGACGTTCGAGATTTACTATCATCACACGATCTAGACGACTCTTCGCCGCTCTCCGCCCCAGATCTTCGCCTCCTCATCGATCGTCTCCAAGTTCATTCACTCGACATTAAGTCCAAAGTTCACAATTACATAGTCTCTCACAATCATGACTTCTCTGCCCTATTTTCTCGCTGCTCCGACGCTGTTGTTAATTCTCAGCAGCTATCCGATCAAGTATCCAATCTCGTCAATCTATTATCATCGGATCGTCAACCGATCGATGTCAAGATCAAGGAAACAGTCGAAGAGGTTAGGAGGAAACGAATTGAAACGAAGGAGAAGAAGGAAACGCTGGATTTAGTGAAGGTAGTGTTGAAATTGAGCCAAGAGTTGAGTGTTGTGGAGAATGATTTGAAGGCTGGGAAGGTCGTTGAGGCGGCGGAGGCCCTTACAGACTTGAAGGTGGCGTTACGAGTCAGAGATAACGTGGAGGATCGCTCGGAGGGAAGGGATCCGATGGTATATGGTTTGTTAAGAAAGAAATGGACAGATTGCTTCGAAGAGATACAAGAGGTGCTAGTGAAGTATGTGGAAAATGCAGTGAGATTCGATCAGCAGTCAAACGCTGTTTATGTCAAGAATACAATGGCTATAAATGATATTCAAGGGGTCGAGCTTAGTACTGTATTGAAAGCAATGCATGTGGTTGGCATTCTAGATTATGGGCTTGCCAAAGTAGCAGACTTGATGACCAGATATGTGATAGCTCCTGCAGTGCAGAGTGGTCCTCATAGTTTTTCTGTAGAAGAGAGAACACTAGATTCAGGATATAAGGCTGAGGTAGTTCTGAGGATAACCCCGCCTTCTGATCCACAGGTTGAAAACTTGGATGCTGAAACTATATATTCTGGAATTAATGTGGTCATTCAATTTATTTTCAACTTTATTTGCTTTAAAAATTCCTCCTGGATGCGGTACTTTGGAAGATTGACATGGCCCCGGATGTCGGAATTGATTATTTCAAACTTTCTATCCAAGATTGTTCCTAACGATGCATCTAAACTTGCTGACTTCCAAACAATAAGACAACTTACTTTTGAGTTTGAGGCATCTCTTAAAGAAATTATGTTCATCTCCTCTGGCAAAGATGAAAGGTTGAGCAACTATGCCGACAATGTTGAAGTTCATTTTGCTACAAGGAAGAAGGTTGAGATTTTAGCAACAGCCAGGGACCTGCTTTTACGTTCAGATTTTAATCTTCCCAAGGACTATTCAAGGAAAAATGCGGAGTTCAAGAATGGTGGAACTGTAGACTTACTTTTCTCGTCTGAGAGGTGTGTCATATCCGGAGCAGCTTCACAACTAATTGAACTTGTGCATCAAACACTCAAGGATGTTTGCTTGTCATCAACACAAGTGGCTCTAGAATTCTACCATGCTGCTAGGGATGCTCTCCTTCTATATGAAGCTGTTATTCCTGTTAAGCTAGAAAGACAGCTGGATGGTATCAACCAGGTTGCCGTTCTCATTCATAATGATTGCCTATTCCTATCACAGGAGATTCTTGGTCTTGCATTTGAGTACCAGTCAGACTTCCCGACTTCCATGAAGGGAGCTGTGTTTATTGATTTGGGTATAAGATACAAGCTGATGGCAGAAGAGATATTACAAAGACAAATACAGCTTGTTAAACATAATTTGATGGAGGCCGTTGATGGTGCTGATGGATTTCAGAATACCCATCAACCAAAGCGATACGAATCTGCAAGATTCAGTATTGATCAGGTAGCTTTTATCCTTGAGAAAGTGCGCATAATATGGGAGCCATTGTTGCTACCGTTGACGTATAAGGGAAGTATGTGCACAGTCTTGGAGGCTGTATGTTCTAGAATGACCAAAGACATACTACTTTTAGATGACATTGCAGCAGAAGAAACATTACAGCTTCAAAGATTAATTCATATGCTGCTGGAAAACCTTTCGTCTTTATTGGAGTCTCTGGTTGCTATGAATCAAACAACGAAACCACAAGAGGCATCATCAGGCTCTATAGATGATCTGATACCATCACTGAGTCAACTACGGATAATGGCAGTTATGTTGGACCTGCCTCTGAAGTCCATTACTGCAAGCTGGGAAAGTGGGGAGCTGGCCAAGTGTGGCTATACTTCCTCTGAGGTGAGAGACTTCATTAGAGCGATATTTACAGATTCACCGTTACGAAGAGAATGTTTGTGGAGGATCGAAAATATCAAGTTTTAA 2265 42.03 MDVLFNSIDVRDLLSSHDLDDSSPLSAPDLRLLIDRLQVHSLDIKSKVHNYIVSHNHDFSALFSRCSDAVVNSQQLSDQVSNLVNLLSSDRQPIDVKIKETVEEVRRKRIETKEKKETLDLVKVVLKLSQELSVVENDLKAGKVVEAAEALTDLKVALRVRDNVEDRSEGRDPMVYGLLRKKWTDCFEEIQEVLVKYVENAVRFDQQSNAVYVKNTMAINDIQGVELSTVLKAMHVVGILDYGLAKVADLMTRYVIAPAVQSGPHSFSVEERTLDSGYKAEVVLRITPPSDPQVENLDAETIYSGINVVIQFIFNFICFKNSSWMRYFGRLTWPRMSELIISNFLSKIVPNDASKLADFQTIRQLTFEFEASLKEIMFISSGKDERLSNYADNVEVHFATRKKVEILATARDLLLRSDFNLPKDYSRKNAEFKNGGTVDLLFSSERCVISGAASQLIELVHQTLKDVCLSSTQVALEFYHAARDALLLYEAVIPVKLERQLDGINQVAVLIHNDCLFLSQEILGLAFEYQSDFPTSMKGAVFIDLGIRYKLMAEEILQRQIQLVKHNLMEAVDGADGFQNTHQPKRYESARFSIDQVAFILEKVRIIWEPLLLPLTYKGSMCTVLEAVCSRMTKDILLLDDIAAEETLQLQRLIHMLLENLSSLLESLVAMNQTTKPQEASSGSIDDLIPSLSQLRIMAVMLDLPLKSITASWESGELAKCGYTSSEVRDFIRAIFTDSPLRRECLWRIENIKF 754
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00739 754 Gene3D - 547 753 IPR046362 -
Armi1g00739 754 PANTHER CENTROMERE-KINETOCHORE PROTEIN ZW10 4 751 - GO:0006888(PANTHER)|GO:0007094(PANTHER)|GO:1990423(PANTHER)
Armi1g00739 754 Pfam Centromere-kinetochore Zw10 N-terminal 37 131 IPR009361 GO:0000278(InterPro)|GO:0000775(InterPro)|GO:0005634(InterPro)
Armi1g00739 754 Pfam ZW10 C-terminal helical domain 593 749 - -
Armi1g00739 754 Pfam Centromere-kinetochore protein zw10, middle domain 179 414 IPR048344 -
Armi1g00739 754 Pfam Centromere-kinetochore protein zw10, C-terminal 442 570 IPR048343 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00739 K11578 protein transport protein DSL1/ZW10