AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00747 ATGAGGAGATGCGACAGTTCTCGACAGTTTTATCCTTTAACCAGTTTCCAGATAGGGGATTTGCAGTCATATCTTTCAGATCTTAGCCTTTTCTTGGCCCCTGATAGCAAGACGTTTTATGTATTGGTGGATAATAGGCCGTGGCTGGAAGATTTGGCATCTAGGCCTGCGCACCTATGGCAGCTGATGGTTACCAAGTCAAGGATGTCCCCTTTTGCGAACACAAGTGGGAAGAAGGGGAGGAAGGGGAGGAAGGAAACTGCAGACCAGAAGGTCCATTCTAAAGCTTCAAGCCGGTCCCAAAACTTGAAAAAATGGTTCTCGGTTGTTAATGCTGCAACACTATCAAGAAAGAGGGCCTTGCTACCTGTAAAGAAACTCAGGAGTTCCTTGCTTGCAAATAGCAAATTGCACAGAACTTTGTATGGTTTCATTGTCTTTCAAGTGATGTGGAAAGATGTTCGTGGTATCAATTACTTGAATGAGCTTCAGACTGATACGTCTCTCGCTGTAGAGGCTAAATACATGAAGAGATGGGAATTTGATAGCATAGCTCAAGCAGCTAAAGATATAACTTCATGGTTTCCAGGGACGCCGCATGAACGATATGTCTTGGAAGAGCATCTCAACTCTATGTTAGGAGACATGTTCCATGATGCTCCTAAAGAATTTCCAGACTGCACCAGCACAAATGAGGATGAAAAAACCTCAAATGCTAGTGAGAAGGGGGAGAATGCATCTCCCTGCAATCCTTGTTGCAATGTTGGTGAGCAACTAGAAAGTTTAGAAGATCAAACAAGTATACTACGAACACCTCCTCCCAACAGACCCTATAAGAGAAGGAAGCTGATGAATCCTGAGGGAATCGATGTTGAGGCCAAATTTTATACGGAAGTAGCTCATGGTGGAGCTGTTTGCACACAAATGCCCTCCTCGTATGCAAGTGATTGTGATGAAACAGCTGAAGCTACCGAGTACAGGGATGTGTTGCTTTTGTTCCGGTTCAACAACCGTGACCTCCCTTTTGAATTGAGAGAAATAATAGTATCTGATTTGAGATTACTTACTCTATTAGAGGCTGGACTTCCATCTTGGGTGATTTTCTTTCAGTCTTACCCTGTATTTTGTCATATATATCGTCCATGGATGTGCCCTCTAGCAAGAGCTCTATATGTGGTCATTTCCGTTGTTACGGTTGTCATTGGTTTCTATGATTTGTACAAAAATGTCCCAGTTCTTAAGGCAACTGCTTCCCATTTATGTGGGCCACTTTTTGATTGGATAGAAACATGGGAGATGGTATCAAGGATCAAATACTTGGGAACTATGCTGTTTCTACACAACTCTGAGAAGGCTGTTATGTGGTTCTTGATGATGACTCGCACTGTTCGATCATTTTTTTCAATTATCACACAACCTTTAGCCGGGCCGTTTCTGGATTTTCTAGAAGTTCTCCTTCCCTTTTGGAACTTATTTGTCCAGATGGGACAGTATTTTGGCTCGTTCATTTGGATTCTGATGGAAACTTCTTGGGACCTAGTGGAGAATCTAACTGAGGTCATACTGGTTCCGGTGTGGTTCACCTTGTCACTTATCTGGATGATTGTAACAACAATTATGTATCCTATATTGTGGTTCCTTTGGGGGATACTCTATGCTCCAATTCGGCTCATTCTCAGTCTATCCGACTTTGTGGGATATGTCTATAACAACATCTATGACTTAGTTGGAGACATATGGCTGTTTGTGAGTGGCATCTTCAAGTTAGCTTCAAATGCTGAGGCAACTGTGAACACTTATGAGGTTTCTATCTGGCGTTCTCTTTGGAATGACCTCTTCTCTCAGGTTTTCCGTGCTCTTCGAAGTATTTTAAACGGCTTTGTTGCATTCTTTACAGCTTGCAATAGACATCGATTAAGCATATACAATCACTTACATGAGTTCACTCGAACAATTAATCAGCCGACCCAGAGGTCACAGCTCTCAAGTTCTAGCCATGGATCACAGAGATCTGGAAGTCTGTCACCAGCAGCAGCCGGGGAACGAAAGGTGCCACGTAGGAGAAATTCAAAACAGAGTTGA 2082 42.84 MRRCDSSRQFYPLTSFQIGDLQSYLSDLSLFLAPDSKTFYVLVDNRPWLEDLASRPAHLWQLMVTKSRMSPFANTSGKKGRKGRKETADQKVHSKASSRSQNLKKWFSVVNAATLSRKRALLPVKKLRSSLLANSKLHRTLYGFIVFQVMWKDVRGINYLNELQTDTSLAVEAKYMKRWEFDSIAQAAKDITSWFPGTPHERYVLEEHLNSMLGDMFHDAPKEFPDCTSTNEDEKTSNASEKGENASPCNPCCNVGEQLESLEDQTSILRTPPPNRPYKRRKLMNPEGIDVEAKFYTEVAHGGAVCTQMPSSYASDCDETAEATEYRDVLLLFRFNNRDLPFELREIIVSDLRLLTLLEAGLPSWVIFFQSYPVFCHIYRPWMCPLARALYVVISVVTVVIGFYDLYKNVPVLKATASHLCGPLFDWIETWEMVSRIKYLGTMLFLHNSEKAVMWFLMMTRTVRSFFSIITQPLAGPFLDFLEVLLPFWNLFVQMGQYFGSFIWILMETSWDLVENLTEVILVPVWFTLSLIWMIVTTIMYPILWFLWGILYAPIRLILSLSDFVGYVYNNIYDLVGDIWLFVSGIFKLASNAEATVNTYEVSIWRSLWNDLFSQVFRALRSILNGFVAFFTACNRHRLSIYNHLHEFTRTINQPTQRSQLSSSSHGSQRSGSLSPAAAGERKVPRRRNSKQS 693
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00747 693 MobiDBLite consensus disorder prediction 223 240 - -
Armi1g00747 693 MobiDBLite consensus disorder prediction 79 93 - -
Armi1g00747 693 MobiDBLite consensus disorder prediction 654 675 - -
Armi1g00747 693 MobiDBLite consensus disorder prediction 223 247 - -
Armi1g00747 693 MobiDBLite consensus disorder prediction 71 99 - -
Armi1g00747 693 PANTHER OS05G0597400 PROTEIN 1 686 - -
Armi1g00747 693 MobiDBLite consensus disorder prediction 654 693 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00747 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
20292 Armi1g00747 Armi7g00323
20293 Armi1g00747 Armi8g02248
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr1:17982215 Armi7g00323 Armi-Chr7:5787989 dispersed
Armi Armi-Chr1:17982215 Armi8g02248 Armi-Chr8:88215498 wgd