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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00786 ATGGCATTGAATAGGGGTGGATCTTGTAATCCTGCCGTCGTGAAGATCGGAATTACGTTCTTAGGACTGTGCTTGGTGGGTTATCTACTAGGTCCGCCGCTATACTGGCATTTTCTTGAAGGCTTAGCCGCCGTACGCCGCTCATCCTCCGCCGCCCCCGCTTCTTGCCCCCCCTGCAACTGCGACTGCGATTCTCAGCCCCTCCTCTCTATTCCTCAAGGGCTAAGCAATAATTCCTTCACAGATTGTGCAAAGCACGATCCTGAAGTGAGCGGAGACACGGAAAAGAATTTTGCGGAGCTTCTATCGGAGGAACTGAAGCTACGTGAAGCGGAAGCTTTAGAAAGTCAGCAGCGTGCTGACATGGCGCTCCTCGAGGCCAAGAAGTTGACATCCCAGTATCAGAAAGAAGCCGACAAATGCAATTCAGGAATGGAAACTTGCGAAGAAGCGCGTGAAAAAGCCGAAGCGGCATTGGTAGCACAAAAACAACAAAGCAAAATGTGGGAATTACGAGCCCGACAAAGAGGCTGGAAGGACGGTGGCGGTGGTAAGTCTGTAAACGCCGTATGA 573 51.48 MALNRGGSCNPAVVKIGITFLGLCLVGYLLGPPLYWHFLEGLAAVRRSSSAAPASCPPCNCDCDSQPLLSIPQGLSNNSFTDCAKHDPEVSGDTEKNFAELLSEELKLREAEALESQQRADMALLEAKKLTSQYQKEADKCNSGMETCEEAREKAEAALVAQKQQSKMWELRARQRGWKDGGGGKSVNAV 190
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00786 190 PANTHER EXPRESSED PROTEIN 1 186 - -
Armi1g00786 190 Coils Coil 108 128 - -
Armi1g00786 190 Coils Coil 145 165 - -
Armi1g00786 190 Pfam Protein of unknown function (DUF1068) 12 180 IPR010471 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00786 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
20301 Armi1g00786 Armi8g02221
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr1:19799414 Armi1g03394 Armi-Chr1:156078323 dispersed
Armi Armi-Chr1:19799414 Armi8g02221 Armi-Chr8:87672049 wgd