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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00813 ATGGCTACCTCCTTCACAAAATCAACCAAATTACCCTTCGTCATCATCTCACTTGTAGCCATTTTTACATCTTCGAGAGCCGATCAACTCGGTGAGCTCAAACAAACCTCCATGACCCTTTACTTCCAAGACTATTTCGGCAGACCCAATGCCACCATGAAACCCGTCACCTTTTTAGCCGATCCCTGGTCCTTCAAACAATTTGGGACCATATTTTGCACCGATGACCCAATGACTGTGGGCATTGACCAGGACTCGGCTCAAGTGGCTCGTGCCCAGGGGATCTATGTGACGTCGGCATTGGATGGGTCCAATATGCATGTTTTGATATCAATAGTGTTTAGTAACAAGGAGTTCGATGGTAGCACATTGGAGGTGCAAGGCGCTAGCAAGCACTTTGAGAGGTTGAGAGAGGTGGCGGTGGTGGGTGGCACCAGTAGGTTTCGGTTGGCCAGAGGTTACGCCACTCTGGAAACTGTTAATCTCGATTTATCTTTATCTTACTCGATTATCGAGGGAAACTTTGCAGTGTGGCATTACTAA 543 47.51 MATSFTKSTKLPFVIISLVAIFTSSRADQLGELKQTSMTLYFQDYFGRPNATMKPVTFLADPWSFKQFGTIFCTDDPMTVGIDQDSAQVARAQGIYVTSALDGSNMHVLISIVFSNKEFDGSTLEVQGASKHFERLREVAVVGGTSRFRLARGYATLETVNLDLSLSYSIIEGNFAVWHY 180
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00813 180 Gene3D - 23 173 IPR044859 -
Armi1g00813 180 Pfam Dirigent-like protein 36 177 IPR004265 -
Armi1g00813 180 PANTHER NUCLEOPORIN-RELATED 16 173 IPR004265 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00813 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr1:21091877 Armi6g01171 Armi-Chr6:24386254 dispersed
Armi Armi-Chr1:21091877 Armi5g01642 Armi-Chr5:41151260 transposed