Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Armi1g00839 | ATGAGTCAAATTACCAGAAAAATGTGGGGTTTGAACCTCAAGAAAACAATCAGCTGGCGTGTAGCTTTTCTCCGGCGATGTGCTCGATCTTTATGGCACCAAATTCTTGCTTGTTGGATCGGAAAATCAATCCAGTACCGTCAGTTGTTAAATTCCGGTTCCGGCCCTTTGATTCCGACTTCTCGTCGTCGGCCGGAGAGGACAACGACGGCGATGGATGTTGCCACCATGTACCACCAGGTGGAAATGACAGCTTCTAGCGGCGATGGGTTCGATTCCGGCGAAATGACGTCATCCTGCGGTGGCTCTGAGGGTTCCGATTTGGTGGCTTTGAAGATTAGTGTGTTGGGTGATCAACATATCGGCAAAACTAGCTTCTTGGCAAAATACGTTGGGAAAGAGAAGAATGAAGAAGAATTAGAAGGCACAGGAATAATAAATCAGATGGATAAAACACTTTGTGTTAAAGGAGCCAGGATTGCCTACAGTATATGGGAAGTGGGTGGTGATGCATTTTATCCAGATGGTGAATTGAGGACCTCGATTCCTGCCGCCTGTAAAGACTCAGTTGCTATATTATTCATGTTCGATTTAACGAGTCGATGTACGCTTAACAGTGTCATCAATTGGCACCAGCAAGCTAGGTATCATAATCAGATGGCGATACCGGTGATGGTCGGGAGCAAGTTTGACGAATTTGTCCAGCTTCCGTTAGATTTACAATGGACGATTGCAAACCAGGCAAGAACATACGCAAAGGCCATAAACGCAACCTTGTTCTTCTCGAGTGCATCTTACAACATAAATGTAAATAAAATCTTCAAGTTCGTAACTGCAAAGCTCTTTGACTTGCCGTGGGCTTTGGAGCGTAATCTTACAATTGGGGAGCCTATCATCGATTTTTGA | 906 | 44.92 | MSQITRKMWGLNLKKTISWRVAFLRRCARSLWHQILACWIGKSIQYRQLLNSGSGPLIPTSRRRPERTTTAMDVATMYHQVEMTASSGDGFDSGEMTSSCGGSEGSDLVALKISVLGDQHIGKTSFLAKYVGKEKNEEELEGTGIINQMDKTLCVKGARIAYSIWEVGGDAFYPDGELRTSIPAACKDSVAILFMFDLTSRCTLNSVINWHQQARYHNQMAIPVMVGSKFDEFVQLPLDLQWTIANQARTYAKAINATLFFSSASYNINVNKIFKFVTAKLFDLPWALERNLTIGEPIIDF | 301 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Armi1g00839 | 301 | Gene3D | - | 106 | 287 | IPR027417 | - | |
| Armi1g00839 | 301 | FunFam | Septum-promoting GTP-binding protein 1 | 102 | 291 | - | - | |
| Armi1g00839 | 301 | PANTHER | - | 109 | 300 | - | GO:0003924(PANTHER)|GO:0005525(PANTHER) | |
| Armi1g00839 | 301 | PRINTS | Transforming protein P21 ras signature | 153 | 175 | - | - | |
| Armi1g00839 | 301 | PRINTS | Transforming protein P21 ras signature | 259 | 281 | - | - | |
| Armi1g00839 | 301 | PRINTS | Transforming protein P21 ras signature | 111 | 132 | - | - | |
| Armi1g00839 | 301 | PRINTS | Transforming protein P21 ras signature | 219 | 232 | - | - | |
| Armi1g00839 | 301 | ProSiteProfiles | small GTPase Rab1 family profile. | 106 | 301 | - | - | |
| Armi1g00839 | 301 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 111 | 293 | IPR027417 | - | |
| Armi1g00839 | 301 | Pfam | Ras family | 112 | 280 | IPR001806 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
| Armi1g00839 | 301 | SMART | rab-sub-5 | 111 | 284 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Armi1g00839 | K07976 | Rab family, other |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 20313 | Armi1g00839 | Armi8g02178 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Armi | Armi-Chr14:76038811 | Armi1g00839 | Armi-Chr1:22008953 | dispersed | |
| Armi | Armi-Chr1:22008953 | Armi5g00463 | Armi-Chr5:9510629 | dispersed | |
| Armi | Armi-Chr1:22008953 | Armi8g02178 | Armi-Chr8:86722393 | wgd |