Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Armi1g00847	ATGGCGGTATACATGAAATTGAAGAATCGCAACAAAACAGTTCCATACATTGAATCTATACATTGTATTATGGATCACCGATTCTTTCTCCTCCTTACCGTTACTCTGCTCGCCGTTTCCTCTTTAGTCTCCGGCGACGATCACTTCGCCGGCACCGGAGACGATGTCTTCATCCGTCAGGTCGTCGGCGACGAAGATCCGTTGTTGTTGAAGGCGGTGGTGGAGCATTACTTTAGTGCATTCAAGAGAAAGTTTGGTAAATCGTATGCGTCACAGGAGGAGCACGATTACAGGTTCTCCGTCTTCAAGACTAACATGCGCCGCGCAAAGCGTCACCAGAAGCTAGATCCGTCGGCTGTCCACGGTGTTACTCAGTTCTCCGACATGACTTCGTCGGAGTTTCGGAAGCATCTTGGACTGAGGTCTCGTCTCAGGTTCCCAGCCGATGCTAGCAAGGCTCCGATCCTTCCGACGGACGATCTTCCGGATGATTTTGATTGGAGAGATCATGGTGCTGTTACTGATGTGAAGGATCAGGGTTCGTGTGGGTCATGCTGGTCGTTTAGTACAACTGGCGCACTAGAAGGTGCGAATTTCCTTGCCACAGGGAAGCTTGAAAGCCTTAGCGAGCAGCAACTTGTTGATTGTGATCATGAGTGCGATCCAGAAGAAGAAGGATCATGTGATTCAGGATGTAGGGGAGGTCTGATGAACAGTGCCTTTGAGTACACTCTCAAAGCTGGTGGGCTTATGAGCGAAAAAGACTACCCTTACACTGGCACTGACCGTGGAAGCTGCAAATTTGATAAAAACAAGATTGTAGCATCTGTGAGTAACTTCAGTTTGGTCTCCCTTGACGAAGACCAGATTGCTGCCAATCTTGTCAAACATGGTCCTCTTGCTGTGGCTATCAATGCAGTTTACATGCAGACATATGTTGGAGGAGTGTCGTGCCCATATGTATGCTCAAAGCGGTTAGACCATGGCGTGCTATTGGTTGGGTACGGTGCGGCTGGCTATGCTCCGGCTAGAATGAAGGAGAAGCCATACTGGATCATTAAAAACTCTTGGGGAAAGAGTTGGGGAGAGAAGGGATATTACAAGATCTGCAAGGGTCATAATGTCTGTGGTGTCGATTCTATGGTCTCGACAGTCGCTGCAGTTGATCGACACTAG	1176	48.64	MAVYMKLKNRNKTVPYIESIHCIMDHRFFLLLTVTLLAVSSLVSGDDHFAGTGDDVFIRQVVGDEDPLLLKAVVEHYFSAFKRKFGKSYASQEEHDYRFSVFKTNMRRAKRHQKLDPSAVHGVTQFSDMTSSEFRKHLGLRSRLRFPADASKAPILPTDDLPDDFDWRDHGAVTDVKDQGSCGSCWSFSTTGALEGANFLATGKLESLSEQQLVDCDHECDPEEEGSCDSGCRGGLMNSAFEYTLKAGGLMSEKDYPYTGTDRGSCKFDKNKIVASVSNFSLVSLDEDQIAANLVKHGPLAVAINAVYMQTYVGGVSCPYVCSKRLDHGVLLVGYGAAGYAPARMKEKPYWIIKNSWGKSWGEKGYYKICKGHNVCGVDSMVSTVAAVDRH	391

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Armi1g00847	391	SMART	Inhibitor-I29-2	78	134	IPR013201	-
	Armi1g00847	391	ProSitePatterns	Eukaryotic thiol (cysteine) proteases histidine active site.	326	336	IPR025660	-
	Armi1g00847	391	SMART	pept-c1	161	386	IPR000668	GO:0006508(InterPro)\|GO:0008234(InterPro)
	Armi1g00847	391	FunFam	Cysteine protease RD19A	56	386	-	-
	Armi1g00847	391	Pfam	Cathepsin propeptide inhibitor domain (I29)	78	134	IPR013201	-
	Armi1g00847	391	ProSitePatterns	Eukaryotic thiol (cysteine) proteases cysteine active site.	179	190	IPR000169	-
	Armi1g00847	391	ProSitePatterns	Eukaryotic thiol (cysteine) proteases asparagine active site.	350	369	IPR025661	-
	Armi1g00847	391	Gene3D	Cysteine proteinases	68	386	-	-
	Armi1g00847	391	CDD	Peptidase-C1A	162	385	IPR039417	-
	Armi1g00847	391	PRINTS	Papain cysteine protease (C1) family signature	179	194	IPR000668	GO:0006508(InterPro)\|GO:0008234(InterPro)
	Armi1g00847	391	PRINTS	Papain cysteine protease (C1) family signature	350	356	IPR000668	GO:0006508(InterPro)\|GO:0008234(InterPro)
	Armi1g00847	391	PRINTS	Papain cysteine protease (C1) family signature	328	338	IPR000668	GO:0006508(InterPro)\|GO:0008234(InterPro)
	Armi1g00847	391	PANTHER	CYSTEINE PROTEASE FAMILY C1-RELATED	79	378	IPR013128	GO:0004197(PANTHER)\|GO:0005615(PANTHER)\|GO:0005764(PANTHER)\|GO:0008234(InterPro)\|GO:0051603(PANTHER)
	Armi1g00847	391	Pfam	Papain family cysteine protease	161	384	IPR000668	GO:0006508(InterPro)\|GO:0008234(InterPro)
	Armi1g00847	391	SUPERFAMILY	Cysteine proteinases	74	385	IPR038765	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Armi1g00847	K01373	cathepsin F [EC:3.4.22.41]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Armi	Armi-Chr14:61629628	Armi1g00847	Armi-Chr1:22412330	dispersed
	Armi	Armi-Chr1:22412330	Armi3g03337	Armi-Chr3:127160384	dispersed
	Armi	Armi-Chr1:22412330	Armi14g01004	Armi-Chr14:61229952	wgd
	Armi	Armi-Chr1:22412330	Armi15g01276	Armi-Chr15:68815537	wgd
	Armi	Armi-Chr1:22412330	Armi15g01276	Armi-Chr15:68815537	wgd
	Armi	Armi-Chr1:22412330	Armi2g01255	Armi-Chr2:39074456	wgd
	Armi	Armi-Chr1:22412330	Armi7g00430	Armi-Chr7:8105453	wgd