Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Armi1g00856	ATGGGCTCTGCATGTTGTGTTGCTGCTAGAGATAGAACTATTACAGATCAATCCGTTAGTGATGTTATGCCGAGGAATGATCGGTATTCGCCATCATGGAGCTTTCGCTGGGATAACCGAGGGCGTGTAGCAGGTGAAGAGTCATCCATGAATTGCTTTTCTGATGGTGCTGGTATGAATGATAGGTTGGACAATAAATCTCGTACAACCATAGAAACCGCTTATGTGACAGAAGAAGGCAGTCCATTGGACAGTTCTCGAAGTCTCACCTGGCAAAAATCGTCACCTTCTGAACAAAATGGAGTTCCTCAGTCAGATCCATTGAACTCTAAGAATCTTCCCGAGGGGAAGGAGTCAAGGAGAACTCCGGTAGCTTTGGAACTGTCTCCAAGCAAAATTTCAACGGCCATGCATTCAGTTTCATCCTTTTCGGCGTCTCCTTTGTCTTCTTCCCAATGCCATCTTCTGCCCCTAACAAGCTTGACCCCATCAAGGTGGCCTCGCCGTTCTCCAGGACACCATCTACTACGGCAAGTATCAGATAGCCGAATTCGAGGCATGATGTCACCTAATATTTCGATATCTGAGGAGGGTTCTCCTTTTATGCACCCTGGGTGGAGCAATAAATCAAACAGGGGTTCTCATGGTGGATCTTCAGATGGTTGGTCTATACCTGCCTTTCCTGAGCTCGCGACAACTTCTAACAGAGATAGATGGTCTTTTGATAGTGATTCTCTCAGCTTTAGTCGTGATAGGATTAGCAGATCAAGTGGCAGGGTTTCTTCCTCCCCTTCCATTGATATGCAGATGTGTGGTGTCTGCTCCAAGCTTTTAACCGAAAAATCTGCTTGGAGAGGCCAAAAAGGCATAGTTGCCAATGGGTACCCTATTGTTGCTGTTCTGGTTTGTGGCCATGTTTACCATGCAGAATGTTTAGAGAGCATGACCCCTGAGATATATGAGTACGATCCAGCATGTCCCGTTTGTACGTTTGGGGAAAAAAAGGTTCTCAAGTTGTCAGAAAAAGCACTTGCAACAGACATGGATTTAAAGGCTAAAATCAGCAAGAAATTAAGGAATCGGGTGATGGATGGTGATTCTGTTGTGTTTAAGAGTAGTGGCTCCAGGATGAGCTCAAGTTCCAGCATGAAGAGCTCTACAGGACATGGGAAGCCGTTCTTAAGAAGACATTTCTCTTTTGGCAACAAATGGAACAGATCCTTGTCAGACAACAGTTATAGGAAAAAGAGATTTTTCTGGACAAAATCAAGCAAGGAGTGA	1281	44.96	MGSACCVAARDRTITDQSVSDVMPRNDRYSPSWSFRWDNRGRVAGEESSMNCFSDGAGMNDRLDNKSRTTIETAYVTEEGSPLDSSRSLTWQKSSPSEQNGVPQSDPLNSKNLPEGKESRRTPVALELSPSKISTAMHSVSSFSASPLSSSQCHLLPLTSLTPSRWPRRSPGHHLLRQVSDSRIRGMMSPNISISEEGSPFMHPGWSNKSNRGSHGGSSDGWSIPAFPELATTSNRDRWSFDSDSLSFSRDRISRSSGRVSSSPSIDMQMCGVCSKLLTEKSAWRGQKGIVANGYPIVAVLVCGHVYHAECLESMTPEIYEYDPACPVCTFGEKKVLKLSEKALATDMDLKAKISKKLRNRVMDGDSVVFKSSGSRMSSSSSMKSSTGHGKPFLRRHFSFGNKWNRSLSDNSYRKKRFFWTKSSKE	426

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Armi1g00856	426	CDD	RING-H2	271	329	-	-
	Armi1g00856	426	MobiDBLite	consensus disorder prediction	47	66	-	-
	Armi1g00856	426	Gene3D	Zinc-RING finger domain, C3HC4 (zinc finger)	252	331	IPR013083	-
	Armi1g00856	426	MobiDBLite	consensus disorder prediction	77	112	-	-
	Armi1g00856	426	SUPERFAMILY	RING-U-box	264	330	-	-
	Armi1g00856	426	ProSiteProfiles	Zinc finger RING-type profile.	271	330	IPR001841	-
	Armi1g00856	426	MobiDBLite	consensus disorder prediction	77	130	-	-
	Armi1g00856	426	PANTHER	EXPRESSED PROTEIN	1	335	-	-
	Armi1g00856	426	MobiDBLite	consensus disorder prediction	194	219	-	-
	Armi1g00856	426	SMART	ring-2	271	329	IPR001841	-
	Armi1g00856	426	MobiDBLite	consensus disorder prediction	204	218	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Armi1g00856	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	20322	Armi1g00856	Armi7g00437
	20323	Armi1g00856	Armi8g02160

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Armi	Armi-Chr1:22735951	Armi8g00285	Armi-Chr8:5567057	dispersed
	Armi	Armi-Chr1:22735951	Armi7g00437	Armi-Chr7:8253961	wgd
	Armi	Armi-Chr1:22735951	Armi8g02160	Armi-Chr8:86351543	wgd