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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00865 ATGACAAGTATACATAAATTTTATGAGGAAATAACCATTACGGTCCCAGTTTTAGGCATCACTTGGCTGCTAGAAACCAATTTGCCTTATTTTCTAATTCTTCCTTTAATAAAGGTTTCTTGTCTTGTGTCAGCTTTTGGTGAGGCTATGCTACATACAATTGGCTACATCTACACAAGGCAGGCTGCAAGAGAATTGGGAAGGGATAAAAGGTATATGAATGTCCCATTTTTAGCAGAATGGGTGAGGGATAAGGGACACCAGATAAAATCACAAGTTTCAGCTGCTTCAGGTGCCGTTGTATTAATTCATACAATGGAGGAGCTTAAGAAGTTGAATGAAGCACAAGCCAAGGAAGAAGAAATAATAAAAACTATCGAGAATAAAAAAGATGCAATGTTTAATTCACTGTGGCAGCTCAATGTTGTAGATATTGAGACCACCTTATCCCATGTCTGTCAAGCGGTGCTCAGAGATCCTAGCGTTTCAAAGGATACGCAGAGGCAATGGGCTAGAGCAATGAAGAAGCTTGGAACCATATTCCAAGGTGCGAAGTCGAATTACCGCAGAGATAACAGTTTACGTGTGGATCCTGCTGCTTCATCTTCTTCGTCCAAGTAA 621 40.26 MTSIHKFYEEITITVPVLGITWLLETNLPYFLILPLIKVSCLVSAFGEAMLHTIGYIYTRQAARELGRDKRYMNVPFLAEWVRDKGHQIKSQVSAASGAVVLIHTMEELKKLNEAQAKEEEIIKTIENKKDAMFNSLWQLNVVDIETTLSHVCQAVLRDPSVSKDTQRQWARAMKKLGTIFQGAKSNYRRDNSLRVDPAASSSSSK 206
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00865 206 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 43 193 IPR052423 -
Armi1g00865 206 Pfam X-domain of DnaJ-containing 44 191 IPR026894 -
Armi1g00865 206 Coils Coil 109 132 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00865 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
20324 Armi1g00865 Armi8g02159
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr1:22860424 Armi3g03506 Armi-Chr3:131734862 dispersed
Armi Armi-Chr1:22860424 Armi8g02159 Armi-Chr8:86298526 wgd