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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Armi1g00876 ATGAACTCTATCAATGTCAAAATGGAAAAAGCCAACGCGATCTTGCGATTCCACAGGCTTCAAACAATCACGACTCTGTTCCGATTCATCGAGATGTTTGTTTTCCTGATTGTGATTTCTAGATTTTCCTCACAACTACCGTTCGCCGTTAAAATCTCCGCTGATAATTTCAGAGGAATATCCGTCTCGTTTTTTAGCCCTAGGTTTGTTTTTGTGATCGGTAACGTGATCGTCCTAATTCTCTTATTCAAATCTCGAGCTTTTGAAAATGGAGATGGCGACGGAAAAGTCGATGTTTACGATGAGTACATACGAAGATGTGAGAAAAGCGTAGTAAATAATACTAGTAACATTTCAACTACTGCTATGATTCCGAGTAAAGAAAGGAAGATTTGCAGGAGTCAATCGGAGAATCTAATGATCGTTGAATGCAAAAATAATAATCAAACTCACCGGAAACTGAGGCGATCAGTGACTGAGAGAAAAATATTGAAGAAAGTAGATCGTGGCGGTGGTGAGACGGCGGCGGAGGATGAAATGAGCAGCGAAGAATTCCGGCGAACGGTGGAGGCGTTTATTACGAGGCAGCAACAATCTCTGAGAAATGAAGAGTTGTTTCCGGTAGCATACATCGGTGAATAA 642 41.28 MNSINVKMEKANAILRFHRLQTITTLFRFIEMFVFLIVISRFSSQLPFAVKISADNFRGISVSFFSPRFVFVIGNVIVLILLFKSRAFENGDGDGKVDVYDEYIRRCEKSVVNNTSNISTTAMIPSKERKICRSQSENLMIVECKNNNQTHRKLRRSVTERKILKKVDRGGGETAAEDEMSSEEFRRTVEAFITRQQQSLRNEELFPVAYIGE 213
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Armi1g00876 213 PANTHER TRANSMEMBRANE PROTEIN 1 205 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Armi1g00876 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
20331 Armi1g00876 Armi7g00448
20332 Armi1g00876 Armi8g02149
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Armi Armi-Chr13:28820617 Armi1g00876 Armi-Chr1:23123085 dispersed
Armi Armi-Chr1:23123085 Armi2g01302 Armi-Chr2:41213054 wgd
Armi Armi-Chr1:23123085 Armi7g00448 Armi-Chr7:8509596 wgd
Armi Armi-Chr1:23123085 Armi8g02149 Armi-Chr8:85839614 wgd